Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.73□□□□□ -0.53
CD74P04233 E2F3P2-201ENST00000447755 1422 ntBASIC11.73□□□□□ -0.53
CD74P04233 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 AL590640.2-201ENST00000457038 527 ntBASIC11.73□□□□□ -0.53
CD74P04233 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.73□□□□□ -0.53
CD74P04233 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.73□□□□□ -0.53
CD74P04233 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 MIR5189-201ENST00000577370 114 ntBASIC11.73□□□□□ -0.53
CD74P04233 CENPX-208ENST00000584347 799 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.73□□□□□ -0.53
CD74P04233 AL132655.2-201ENST00000596276 594 ntBASIC11.73□□□□□ -0.53
CD74P04233 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 AL033527.5-201ENST00000641382 801 ntBASIC11.73□□□□□ -0.53
CD74P04233 LINC01815-202ENST00000641468 1409 ntBASIC11.73□□□□□ -0.53
CD74P04233 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CD74P04233 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CD74P04233 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CD74P04233 LINC02228-202ENST00000641261 2489 ntBASIC11.72□□□□□ -0.53
CD74P04233 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 AC092028.1-202ENST00000641483 3547 ntBASIC11.72□□□□□ -0.53
CD74P04233 AC092028.1-201ENST00000641781 3540 ntBASIC11.72□□□□□ -0.53
CD74P04233 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.72□□□□□ -0.53
CD74P04233 AL355994.2-201ENST00000447882 704 ntBASIC11.72□□□□□ -0.53
CD74P04233 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.72□□□□□ -0.53
CD74P04233 PGAM1P5-201ENST00000548011 764 ntBASIC11.72□□□□□ -0.53
CD74P04233 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.72□□□□□ -0.53
CD74P04233 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC11.72□□□□□ -0.53
CD74P04233 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.72□□□□□ -0.53
CD74P04233 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.72□□□□□ -0.53
CD74P04233 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 LINC01209-201ENST00000451289 2400 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CD74P04233 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CD74P04233 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms