Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 BRD7P5-201ENST00000299197 1822 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 DPM3-202ENST00000368399 517 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 AL591846.1-201ENST00000451736 433 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.58□□□□□ -0.24
KRT6AP02538 BNIP3P42-201ENST00000454982 569 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC005740.2-201ENST00000511085 419 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.58□□□□□ -0.24
KRT6AP02538 BNIP3P29-201ENST00000598302 571 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.58□□□□□ -0.24
KRT6AP02538 AL157813.1-201ENST00000612996 587 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC011447.5-201ENST00000616168 564 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC015967.2-201ENST00000624092 234 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC006435.4-201ENST00000625037 234 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AL356737.1-201ENST00000634391 234 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AL139424.3-202ENST00000641619 917 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 AC004623.1-201ENST00000624592 2127 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 MARK2P16-201ENST00000605714 1723 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 AC108024.1-201ENST00000626286 1721 ntBASIC13.58□□□□□ -0.24
KRT6AP02538 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KRT6AP02538 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.58□□□□□ -0.24
KRT6AP02538 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 MSNP1-201ENST00000511640 1732 ntBASIC13.57□□□□□ -0.24
KRT6AP02538 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.57□□□□□ -0.24
KRT6AP02538 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.57□□□□□ -0.24
KRT6AP02538 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
KRT6AP02538 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 AC013355.1-201ENST00000562625 723 ntBASIC13.57□□□□□ -0.24
KRT6AP02538 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 AC005695.3-201ENST00000614522 232 ntBASIC13.57□□□□□ -0.24
KRT6AP02538 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
KRT6AP02538 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KRT6AP02538 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRT6AP02538 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms