Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC18.7■□□□□ 0.58
ATF3P18847 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC18.7■□□□□ 0.58
ATF3P18847 AC211476.2-201ENST00000608799 708 ntBASIC18.7■□□□□ 0.58
ATF3P18847 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC18.7■□□□□ 0.58
ATF3P18847 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATF3P18847 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 TBC1D3P1-201ENST00000590047 1693 ntBASIC18.69■□□□□ 0.58
ATF3P18847 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 AC024475.2-201ENST00000312173 879 ntBASIC18.69■□□□□ 0.58
ATF3P18847 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 SNORD23-201ENST00000408876 110 ntBASIC18.69■□□□□ 0.58
ATF3P18847 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC18.69■□□□□ 0.58
ATF3P18847 HMGN1P4-201ENST00000419500 290 ntBASIC18.69■□□□□ 0.58
ATF3P18847 AC012066.1-201ENST00000439252 694 ntBASIC18.69■□□□□ 0.58
ATF3P18847 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 RN7SL789P-201ENST00000478944 293 ntBASIC18.69■□□□□ 0.58
ATF3P18847 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 ABCC6P2-201ENST00000526069 590 ntBASIC18.69■□□□□ 0.58
ATF3P18847 ALG10-202ENST00000538927 571 ntTSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 AC127002.1-201ENST00000619123 455 ntBASIC18.69■□□□□ 0.58
ATF3P18847 AC010601.2-201ENST00000623060 774 ntBASIC18.69■□□□□ 0.58
ATF3P18847 AC073592.10-201ENST00000624789 597 ntBASIC18.69■□□□□ 0.58
ATF3P18847 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ATF3P18847 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATF3P18847 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATF3P18847 MKRN7P-201ENST00000433469 1371 ntBASIC18.68■□□□□ 0.58
ATF3P18847 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 AL031587.5-201ENST00000624344 1849 ntBASIC18.68■□□□□ 0.58
ATF3P18847 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATF3P18847 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ATF3P18847 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 AC012513.2-201ENST00000441511 1137 ntBASIC18.68■□□□□ 0.58
ATF3P18847 RPL21P135-201ENST00000442539 791 ntBASIC18.68■□□□□ 0.58
ATF3P18847 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 FAM213AP2-201ENST00000521579 683 ntBASIC18.68■□□□□ 0.58
ATF3P18847 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC18.68■□□□□ 0.58
ATF3P18847 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 DDX11L8-201ENST00000535849 366 ntBASIC18.68■□□□□ 0.58
ATF3P18847 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC18.68■□□□□ 0.58
ATF3P18847 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 IGHV1OR16-3-201ENST00000568138 205 ntBASIC18.68■□□□□ 0.58
ATF3P18847 AC131274.3-201ENST00000578745 1271 ntBASIC18.68■□□□□ 0.58
ATF3P18847 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC18.68■□□□□ 0.58
ATF3P18847 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATF3P18847 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
ATF3P18847 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC18.68■□□□□ 0.58
ATF3P18847 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC18.68■□□□□ 0.58
ATF3P18847 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ATF3P18847 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATF3P18847 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms