Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PTPN22Q9Y2R2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PTPN22Q9Y2R2 AC096887.2-201ENST00000623443 1957 ntBASIC25.85■■□□□ 1.73
PTPN22Q9Y2R2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 AC137761.2-201ENST00000561729 223 ntBASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 AC145350.3-201ENST00000569033 163 ntBASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PTPN22Q9Y2R2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 KRT18P61-201ENST00000585825 1298 ntBASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PTPN22Q9Y2R2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.83■■□□□ 1.72
PTPN22Q9Y2R2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.83■■□□□ 1.72
PTPN22Q9Y2R2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PTPN22Q9Y2R2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.81■■□□□ 1.72
PTPN22Q9Y2R2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
PTPN22Q9Y2R2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTPN22Q9Y2R2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PTPN22Q9Y2R2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
PTPN22Q9Y2R2 AC006970.2-201ENST00000450065 779 ntBASIC25.8■■□□□ 1.72
PTPN22Q9Y2R2 AL022069.1-201ENST00000568025 1636 ntBASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 CROCCP5-201ENST00000436658 830 ntBASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PTPN22Q9Y2R2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 CD99P1-205ENST00000527459 561 ntBASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.78■■□□□ 1.72
PTPN22Q9Y2R2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 NCF1B-203ENST00000435988 1254 ntBASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PTPN22Q9Y2R2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 AP005435.1-201ENST00000529293 1178 ntBASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PTPN22Q9Y2R2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 BID-214ENST00000617586 542 ntTSL 5 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 AC145676.1-201ENST00000514988 2004 ntBASIC25.75■■□□□ 1.71
PTPN22Q9Y2R2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
PTPN22Q9Y2R2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms