Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 AC144652.1-201ENST00000609974 1624 ntBASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDH18Q9HCL0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 MIR6724-1-201ENST00000616420 92 ntBASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 MIR6724-2-201ENST00000616483 92 ntBASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 MIR6724-4-201ENST00000617390 92 ntBASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 MIR6724-3-201ENST00000622482 92 ntBASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDH18Q9HCL0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDH18Q9HCL0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 AC009102.2-201ENST00000606772 1639 ntBASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDH18Q9HCL0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 KRT16P3-201ENST00000439127 1283 ntBASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDH18Q9HCL0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH18Q9HCL0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.18■■□□□ 1.3
PCDH18Q9HCL0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH18Q9HCL0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDH18Q9HCL0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDH18Q9HCL0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PCDH18Q9HCL0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDH18Q9HCL0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH18Q9HCL0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH18Q9HCL0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH18Q9HCL0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDH18Q9HCL0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH18Q9HCL0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDH18Q9HCL0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDH18Q9HCL0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PCDH18Q9HCL0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDH18Q9HCL0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 C1orf229-201ENST00000623686 2258 ntBASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms