Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 MIR6724-1-201ENST00000616420 92 ntBASIC28.25■■■□□ 2.11
CHMP4BQ9H444 MIR6724-2-201ENST00000616483 92 ntBASIC28.25■■■□□ 2.11
CHMP4BQ9H444 MIR6724-4-201ENST00000617390 92 ntBASIC28.25■■■□□ 2.11
CHMP4BQ9H444 MIR6724-3-201ENST00000622482 92 ntBASIC28.25■■■□□ 2.11
CHMP4BQ9H444 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.25■■■□□ 2.11
CHMP4BQ9H444 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC28.25■■■□□ 2.11
CHMP4BQ9H444 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 LSM4-201ENST00000252816 986 ntTSL 2 BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHMP4BQ9H444 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.23■■■□□ 2.11
CHMP4BQ9H444 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC28.23■■■□□ 2.11
CHMP4BQ9H444 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHMP4BQ9H444 LINC01529-204ENST00000636474 1715 ntBASIC28.23■■■□□ 2.11
CHMP4BQ9H444 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CHMP4BQ9H444 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 UNC93B8-201ENST00000511903 705 ntBASIC28.22■■■□□ 2.11
CHMP4BQ9H444 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 GCA-201ENST00000233612 1694 ntTSL 2 BASIC28.22■■■□□ 2.11
CHMP4BQ9H444 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHMP4BQ9H444 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.11
CHMP4BQ9H444 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.11
CHMP4BQ9H444 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
CHMP4BQ9H444 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.2■■■□□ 2.1
CHMP4BQ9H444 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.19■■■□□ 2.1
CHMP4BQ9H444 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 AC009102.2-201ENST00000606772 1639 ntBASIC28.18■■■□□ 2.1
CHMP4BQ9H444 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHMP4BQ9H444 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 KRT16P3-201ENST00000439127 1283 ntBASIC28.17■■■□□ 2.1
CHMP4BQ9H444 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 DUX4L4-201ENST00000566884 1269 ntBASIC28.17■■■□□ 2.1
CHMP4BQ9H444 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.17■■■□□ 2.1
CHMP4BQ9H444 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHMP4BQ9H444 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHMP4BQ9H444 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.16■■■□□ 2.1
CHMP4BQ9H444 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
CHMP4BQ9H444 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHMP4BQ9H444 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 GUSBP5-201ENST00000418136 578 ntBASIC28.15■■■□□ 2.1
CHMP4BQ9H444 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHMP4BQ9H444 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.14■■■□□ 2.1
CHMP4BQ9H444 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
CHMP4BQ9H444 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC28.14■■■□□ 2.1
CHMP4BQ9H444 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.14■■■□□ 2.1
CHMP4BQ9H444 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHMP4BQ9H444 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHMP4BQ9H444 C9orf163-202ENST00000624034 2573 ntBASIC28.13■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms