Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDH23Q9H251 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CDH23Q9H251 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CDH23Q9H251 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CDH23Q9H251 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.18■■□□□ 1.46
CDH23Q9H251 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDH23Q9H251 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
CDH23Q9H251 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CDH23Q9H251 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDH23Q9H251 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDH23Q9H251 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
CDH23Q9H251 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CDH23Q9H251 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.17■■□□□ 1.46
CDH23Q9H251 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.17■■□□□ 1.46
CDH23Q9H251 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.17■■□□□ 1.46
CDH23Q9H251 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.17■■□□□ 1.46
CDH23Q9H251 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CDH23Q9H251 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CDH23Q9H251 GPX1P1-201ENST00000388829 606 ntBASIC24.16■■□□□ 1.46
CDH23Q9H251 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.16■■□□□ 1.46
CDH23Q9H251 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDH23Q9H251 BID-214ENST00000617586 542 ntTSL 5 BASIC24.16■■□□□ 1.46
CDH23Q9H251 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CDH23Q9H251 AC004854.2-201ENST00000608450 1441 ntBASIC24.16■■□□□ 1.46
CDH23Q9H251 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CDH23Q9H251 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.16■■□□□ 1.46
CDH23Q9H251 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
CDH23Q9H251 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDH23Q9H251 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDH23Q9H251 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.15■■□□□ 1.46
CDH23Q9H251 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.15■■□□□ 1.46
CDH23Q9H251 AC091060.1-201ENST00000623524 1766 ntBASIC24.14■■□□□ 1.46
CDH23Q9H251 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.14■■□□□ 1.46
CDH23Q9H251 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.14■■□□□ 1.45
CDH23Q9H251 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 AC010501.1-201ENST00000606270 1962 ntBASIC24.14■■□□□ 1.45
CDH23Q9H251 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 AC135731.1-201ENST00000569415 2548 ntBASIC24.14■■□□□ 1.45
CDH23Q9H251 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.14■■□□□ 1.45
CDH23Q9H251 AC098590.1-201ENST00000468126 897 ntBASIC24.14■■□□□ 1.45
CDH23Q9H251 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDH23Q9H251 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.13■■□□□ 1.45
CDH23Q9H251 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.13■■□□□ 1.45
CDH23Q9H251 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CDH23Q9H251 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH23Q9H251 AC133637.1-201ENST00000624115 1537 ntBASIC24.13■■□□□ 1.45
CDH23Q9H251 LINC02228-203ENST00000641970 1355 ntBASIC24.13■■□□□ 1.45
CDH23Q9H251 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CDH23Q9H251 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.13■■□□□ 1.45
CDH23Q9H251 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.13■■□□□ 1.45
CDH23Q9H251 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDH23Q9H251 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.13■■□□□ 1.45
CDH23Q9H251 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH23Q9H251 AL050303.2-201ENST00000619798 666 ntBASIC24.12■■□□□ 1.45
CDH23Q9H251 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH23Q9H251 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH23Q9H251 TPRG1LP1-201ENST00000598702 760 ntBASIC24.12■■□□□ 1.45
CDH23Q9H251 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH23Q9H251 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CDH23Q9H251 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.12■■□□□ 1.45
CDH23Q9H251 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDH23Q9H251 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH23Q9H251 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.11■■□□□ 1.45
CDH23Q9H251 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
CDH23Q9H251 AL138781.1-201ENST00000566567 1274 ntBASIC24.11■■□□□ 1.45
CDH23Q9H251 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDH23Q9H251 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDH23Q9H251 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.11■■□□□ 1.45
CDH23Q9H251 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CDH23Q9H251 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.1■■□□□ 1.45
CDH23Q9H251 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.1■■□□□ 1.45
CDH23Q9H251 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDH23Q9H251 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.1■■□□□ 1.45
CDH23Q9H251 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.1■■□□□ 1.45
CDH23Q9H251 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.1■■□□□ 1.45
CDH23Q9H251 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.09■■□□□ 1.45
CDH23Q9H251 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.09■■□□□ 1.45
CDH23Q9H251 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.09■■□□□ 1.45
CDH23Q9H251 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
CDH23Q9H251 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDH23Q9H251 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.09■■□□□ 1.45
CDH23Q9H251 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms