Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXC2Q99958 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXC2Q99958 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXC2Q99958 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXC2Q99958 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.95■□□□□ 0.62
FOXC2Q99958 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXC2Q99958 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.95■□□□□ 0.62
FOXC2Q99958 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
FOXC2Q99958 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.95■□□□□ 0.62
FOXC2Q99958 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXC2Q99958 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXC2Q99958 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
FOXC2Q99958 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXC2Q99958 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
FOXC2Q99958 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXC2Q99958 CD99P1-205ENST00000527459 561 ntBASIC18.94■□□□□ 0.62
FOXC2Q99958 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXC2Q99958 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXC2Q99958 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXC2Q99958 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXC2Q99958 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXC2Q99958 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXC2Q99958 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXC2Q99958 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
FOXC2Q99958 NCF1B-203ENST00000435988 1254 ntBASIC18.93■□□□□ 0.62
FOXC2Q99958 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXC2Q99958 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXC2Q99958 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXC2Q99958 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXC2Q99958 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXC2Q99958 AC133637.1-201ENST00000624115 1537 ntBASIC18.93■□□□□ 0.62
FOXC2Q99958 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXC2Q99958 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXC2Q99958 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXC2Q99958 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXC2Q99958 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXC2Q99958 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXC2Q99958 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXC2Q99958 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXC2Q99958 AC091060.1-201ENST00000623524 1766 ntBASIC18.91■□□□□ 0.62
FOXC2Q99958 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXC2Q99958 CROCCP5-201ENST00000436658 830 ntBASIC18.91■□□□□ 0.62
FOXC2Q99958 AP005435.1-201ENST00000529293 1178 ntBASIC18.91■□□□□ 0.62
FOXC2Q99958 AC105233.4-201ENST00000642045 216 ntBASIC18.91■□□□□ 0.62
FOXC2Q99958 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXC2Q99958 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXC2Q99958 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXC2Q99958 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXC2Q99958 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXC2Q99958 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
FOXC2Q99958 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 ERN1-208ENST00000606895 2068 ntBASIC18.9■□□□□ 0.62
FOXC2Q99958 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXC2Q99958 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXC2Q99958 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXC2Q99958 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXC2Q99958 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXC2Q99958 OR2I1P-207ENST00000453522 948 ntBASIC18.9■□□□□ 0.62
FOXC2Q99958 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXC2Q99958 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 KRT18P61-201ENST00000585825 1298 ntBASIC18.9■□□□□ 0.62
FOXC2Q99958 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXC2Q99958 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
FOXC2Q99958 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXC2Q99958 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXC2Q99958 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXC2Q99958 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXC2Q99958 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXC2Q99958 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
FOXC2Q99958 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXC2Q99958 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXC2Q99958 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXC2Q99958 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXC2Q99958 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXC2Q99958 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.89■□□□□ 0.61
FOXC2Q99958 AL161729.1-201ENST00000604104 1402 ntBASIC18.89■□□□□ 0.61
FOXC2Q99958 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
FOXC2Q99958 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.88■□□□□ 0.61
FOXC2Q99958 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.88■□□□□ 0.61
FOXC2Q99958 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FOXC2Q99958 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.88■□□□□ 0.61
FOXC2Q99958 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms