Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NBPF4Q96M43 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
NBPF4Q96M43 MIR572-201ENST00000384983 95 ntBASIC29.86■■■□□ 2.37
NBPF4Q96M43 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.86■■■□□ 2.37
NBPF4Q96M43 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.86■■■□□ 2.37
NBPF4Q96M43 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.86■■■□□ 2.37
NBPF4Q96M43 MIR6084-201ENST00000622012 110 ntBASIC29.86■■■□□ 2.37
NBPF4Q96M43 AC138932.3-201ENST00000567634 1902 ntBASIC29.86■■■□□ 2.37
NBPF4Q96M43 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.86■■■□□ 2.37
NBPF4Q96M43 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NBPF4Q96M43 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
NBPF4Q96M43 AC027612.3-201ENST00000413684 1047 ntBASIC29.85■■■□□ 2.37
NBPF4Q96M43 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.85■■■□□ 2.37
NBPF4Q96M43 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
NBPF4Q96M43 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
NBPF4Q96M43 AL358852.1-201ENST00000623174 1268 ntBASIC29.84■■■□□ 2.37
NBPF4Q96M43 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.84■■■□□ 2.37
NBPF4Q96M43 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
NBPF4Q96M43 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NBPF4Q96M43 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NBPF4Q96M43 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
NBPF4Q96M43 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.83■■■□□ 2.37
NBPF4Q96M43 AC092437.1-201ENST00000624794 1048 ntBASIC29.83■■■□□ 2.37
NBPF4Q96M43 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.82■■■□□ 2.36
NBPF4Q96M43 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
NBPF4Q96M43 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
NBPF4Q96M43 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.82■■■□□ 2.36
NBPF4Q96M43 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NBPF4Q96M43 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.82■■■□□ 2.36
NBPF4Q96M43 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.82■■■□□ 2.36
NBPF4Q96M43 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.82■■■□□ 2.36
NBPF4Q96M43 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NBPF4Q96M43 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NBPF4Q96M43 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NBPF4Q96M43 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
NBPF4Q96M43 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
NBPF4Q96M43 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
NBPF4Q96M43 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.8■■■□□ 2.36
NBPF4Q96M43 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 AC123595.1-201ENST00000440769 1046 ntBASIC29.8■■■□□ 2.36
NBPF4Q96M43 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.8■■■□□ 2.36
NBPF4Q96M43 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.8■■■□□ 2.36
NBPF4Q96M43 AC012414.1-201ENST00000556676 535 ntBASIC29.8■■■□□ 2.36
NBPF4Q96M43 DUX4L4-201ENST00000566884 1269 ntBASIC29.8■■■□□ 2.36
NBPF4Q96M43 RARRES2P11-201ENST00000635158 484 ntBASIC29.8■■■□□ 2.36
NBPF4Q96M43 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NBPF4Q96M43 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.8■■■□□ 2.36
NBPF4Q96M43 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.79■■■□□ 2.36
NBPF4Q96M43 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.79■■■□□ 2.36
NBPF4Q96M43 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.79■■■□□ 2.36
NBPF4Q96M43 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC29.79■■■□□ 2.36
NBPF4Q96M43 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.79■■■□□ 2.36
NBPF4Q96M43 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
NBPF4Q96M43 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
NBPF4Q96M43 FP325331.1-202ENST00000623531 1380 ntBASIC29.78■■■□□ 2.36
NBPF4Q96M43 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.78■■■□□ 2.36
NBPF4Q96M43 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC29.78■■■□□ 2.36
NBPF4Q96M43 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
NBPF4Q96M43 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.77■■■□□ 2.36
NBPF4Q96M43 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 OR2I1P-207ENST00000453522 948 ntBASIC29.77■■■□□ 2.36
NBPF4Q96M43 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.77■■■□□ 2.36
NBPF4Q96M43 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
NBPF4Q96M43 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.76■■■□□ 2.36
NBPF4Q96M43 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NBPF4Q96M43 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
NBPF4Q96M43 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NBPF4Q96M43 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 AC090192.1-201ENST00000517740 490 ntBASIC29.76■■■□□ 2.35
NBPF4Q96M43 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
NBPF4Q96M43 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
NBPF4Q96M43 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
NBPF4Q96M43 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.75■■■□□ 2.35
NBPF4Q96M43 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms