Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 C1orf229-201ENST00000623686 2258 ntBASIC23.48■■□□□ 1.35
RNF25Q96BH1 LINC00565-201ENST00000562710 2331 ntBASIC23.48■■□□□ 1.35
RNF25Q96BH1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.48■■□□□ 1.35
RNF25Q96BH1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RNF25Q96BH1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RNF25Q96BH1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RNF25Q96BH1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
RNF25Q96BH1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF25Q96BH1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF25Q96BH1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RNF25Q96BH1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF25Q96BH1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
RNF25Q96BH1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RNF25Q96BH1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF25Q96BH1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RNF25Q96BH1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RNF25Q96BH1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RNF25Q96BH1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.45■■□□□ 1.34
RNF25Q96BH1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
RNF25Q96BH1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF25Q96BH1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.45■■□□□ 1.34
RNF25Q96BH1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF25Q96BH1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RNF25Q96BH1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RNF25Q96BH1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF25Q96BH1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
RNF25Q96BH1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
RNF25Q96BH1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.44■■□□□ 1.34
RNF25Q96BH1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.44■■□□□ 1.34
RNF25Q96BH1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.44■■□□□ 1.34
RNF25Q96BH1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
RNF25Q96BH1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RNF25Q96BH1 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF25Q96BH1 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF25Q96BH1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.43■■□□□ 1.34
RNF25Q96BH1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.43■■□□□ 1.34
RNF25Q96BH1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RNF25Q96BH1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF25Q96BH1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF25Q96BH1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RNF25Q96BH1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.42■■□□□ 1.34
RNF25Q96BH1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RNF25Q96BH1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.42■■□□□ 1.34
RNF25Q96BH1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
RNF25Q96BH1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
RNF25Q96BH1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RNF25Q96BH1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF25Q96BH1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF25Q96BH1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF25Q96BH1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RNF25Q96BH1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.41■■□□□ 1.34
RNF25Q96BH1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF25Q96BH1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF25Q96BH1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF25Q96BH1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF25Q96BH1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF25Q96BH1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF25Q96BH1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF25Q96BH1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.4■■□□□ 1.34
RNF25Q96BH1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF25Q96BH1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
RNF25Q96BH1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.34
RNF25Q96BH1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RNF25Q96BH1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF25Q96BH1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF25Q96BH1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF25Q96BH1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.39■■□□□ 1.33
RNF25Q96BH1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF25Q96BH1 AC021242.3-201ENST00000607598 1377 ntBASIC23.39■■□□□ 1.33
RNF25Q96BH1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms