Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Zcchc9Q8R1J3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Zcchc9Q8R1J3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc9Q8R1J3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc9Q8R1J3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc9Q8R1J3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zcchc9Q8R1J3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zcchc9Q8R1J3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Zcchc9Q8R1J3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc9Q8R1J3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zcchc9Q8R1J3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zcchc9Q8R1J3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Gm7291-201ENSMUST00000199147 382 ntBASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Zcchc9Q8R1J3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Zcchc9Q8R1J3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Gm10493-201ENSMUST00000097270 612 ntBASIC19.84■□□□□ 0.77
Zcchc9Q8R1J3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms