Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.2■□□□□ 0.66
CSMD2Q7Z408 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 SLC6A10P-202ENST00000431994 2058 ntBASIC19.19■□□□□ 0.66
CSMD2Q7Z408 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CSMD2Q7Z408 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 BID-214ENST00000617586 542 ntTSL 5 BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSMD2Q7Z408 GPX1P1-201ENST00000388829 606 ntBASIC19.17■□□□□ 0.66
CSMD2Q7Z408 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AC009086.3-201ENST00000623486 1008 ntBASIC19.17■□□□□ 0.66
CSMD2Q7Z408 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AC004854.2-201ENST00000608450 1441 ntBASIC19.17■□□□□ 0.66
CSMD2Q7Z408 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AC098590.1-201ENST00000468126 897 ntBASIC19.17■□□□□ 0.66
CSMD2Q7Z408 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 AL138781.1-201ENST00000566567 1274 ntBASIC19.17■□□□□ 0.66
CSMD2Q7Z408 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSMD2Q7Z408 LINC02228-203ENST00000641970 1355 ntBASIC19.16■□□□□ 0.66
CSMD2Q7Z408 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSMD2Q7Z408 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 AL050303.2-201ENST00000619798 666 ntBASIC19.15■□□□□ 0.66
CSMD2Q7Z408 AC091060.1-201ENST00000623524 1766 ntBASIC19.15■□□□□ 0.66
CSMD2Q7Z408 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSMD2Q7Z408 AC133637.1-201ENST00000624115 1537 ntBASIC19.14■□□□□ 0.66
CSMD2Q7Z408 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CSMD2Q7Z408 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.14■□□□□ 0.66
CSMD2Q7Z408 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 TPRG1LP1-201ENST00000598702 760 ntBASIC19.14■□□□□ 0.65
CSMD2Q7Z408 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.14■□□□□ 0.65
CSMD2Q7Z408 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 AC135731.1-201ENST00000569415 2548 ntBASIC19.13■□□□□ 0.65
CSMD2Q7Z408 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 SLC7A5P2-201ENST00000553010 536 ntBASIC19.13■□□□□ 0.65
CSMD2Q7Z408 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.13■□□□□ 0.65
CSMD2Q7Z408 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 AC010501.1-201ENST00000606270 1962 ntBASIC19.12■□□□□ 0.65
CSMD2Q7Z408 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CSMD2Q7Z408 AC069152.1-201ENST00000438030 544 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms