Protein–RNA interactions for Protein: Q5T2W1

PDZK1, Na(+)/H(+) exchange regulatory cofactor NHE-RF3, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1Q5T2W1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 AC239859.2-201ENST00000444165 318 ntBASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZK1Q5T2W1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 MIR4787-201ENST00000607364 84 ntBASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZK1Q5T2W1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 AC092028.1-203ENST00000608262 953 ntBASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PDZK1Q5T2W1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.83■□□□□ 0.93
PDZK1Q5T2W1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PDZK1Q5T2W1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDZK1Q5T2W1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDZK1Q5T2W1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDZK1Q5T2W1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDZK1Q5T2W1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 AC092068.2-201ENST00000590491 1708 ntBASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 MIR6722-201ENST00000617286 78 ntBASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PDZK1Q5T2W1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZK1Q5T2W1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.8■□□□□ 0.92
PDZK1Q5T2W1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDZK1Q5T2W1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.8■□□□□ 0.92
PDZK1Q5T2W1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.79■□□□□ 0.92
PDZK1Q5T2W1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDZK1Q5T2W1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PDZK1Q5T2W1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms