Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATRXP46100 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.76■□□□□ 0.91
ATRXP46100 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.76■□□□□ 0.91
ATRXP46100 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.76■□□□□ 0.91
ATRXP46100 AC092118.2-201ENST00000613495 667 ntBASIC20.76■□□□□ 0.91
ATRXP46100 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.75■□□□□ 0.91
ATRXP46100 AC091060.1-201ENST00000623524 1766 ntBASIC20.75■□□□□ 0.91
ATRXP46100 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ATRXP46100 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
ATRXP46100 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.75■□□□□ 0.91
ATRXP46100 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATRXP46100 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATRXP46100 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.75■□□□□ 0.91
ATRXP46100 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.75■□□□□ 0.91
ATRXP46100 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.74■□□□□ 0.91
ATRXP46100 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATRXP46100 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATRXP46100 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATRXP46100 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.74■□□□□ 0.91
ATRXP46100 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATRXP46100 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.73■□□□□ 0.91
ATRXP46100 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.73■□□□□ 0.91
ATRXP46100 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.73■□□□□ 0.91
ATRXP46100 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATRXP46100 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATRXP46100 AC009086.3-201ENST00000623486 1008 ntBASIC20.73■□□□□ 0.91
ATRXP46100 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.73■□□□□ 0.91
ATRXP46100 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
ATRXP46100 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATRXP46100 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
ATRXP46100 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ATRXP46100 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.72■□□□□ 0.91
ATRXP46100 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.72■□□□□ 0.91
ATRXP46100 SLC29A4P1-201ENST00000398760 971 ntBASIC20.72■□□□□ 0.91
ATRXP46100 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATRXP46100 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATRXP46100 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.72■□□□□ 0.91
ATRXP46100 pRNA.6-201ENST00000610482 90 ntBASIC20.72■□□□□ 0.91
ATRXP46100 pRNA.5-201ENST00000612139 90 ntBASIC20.72■□□□□ 0.91
ATRXP46100 pRNA.11-201ENST00000618423 90 ntBASIC20.72■□□□□ 0.91
ATRXP46100 pRNA.13-201ENST00000619112 90 ntBASIC20.72■□□□□ 0.91
ATRXP46100 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
ATRXP46100 TSPY6P-201ENST00000448518 926 ntBASIC20.71■□□□□ 0.91
ATRXP46100 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATRXP46100 AC073912.3-201ENST00000624414 853 ntBASIC20.71■□□□□ 0.91
ATRXP46100 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATRXP46100 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.71■□□□□ 0.91
ATRXP46100 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 DUSP5P2-201ENST00000426873 1033 ntBASIC20.71■□□□□ 0.91
ATRXP46100 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.71■□□□□ 0.91
ATRXP46100 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.71■□□□□ 0.91
ATRXP46100 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ATRXP46100 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.71■□□□□ 0.91
ATRXP46100 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATRXP46100 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 AC004854.2-201ENST00000608450 1441 ntBASIC20.7■□□□□ 0.9
ATRXP46100 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATRXP46100 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
ATRXP46100 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.69■□□□□ 0.9
ATRXP46100 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.69■□□□□ 0.9
ATRXP46100 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.69■□□□□ 0.9
ATRXP46100 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.69■□□□□ 0.9
ATRXP46100 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATRXP46100 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ATRXP46100 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ATRXP46100 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
ATRXP46100 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATRXP46100 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATRXP46100 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.68■□□□□ 0.9
ATRXP46100 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.68■□□□□ 0.9
ATRXP46100 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
ATRXP46100 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATRXP46100 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRXP46100 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRXP46100 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms