Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 DCC1YCL016C 1143 nt3.94□□□□□ -1.78
CDC40P40968 FDC1YDR539W 1512 nt3.94□□□□□ -1.78
CDC40P40968 ADE4YMR300C 1533 nt3.94□□□□□ -1.78
CDC40P40968 YRB30YGL164C 1323 nt3.94□□□□□ -1.78
CDC40P40968 YMR102CYMR102C 2505 nt3.93□□□□□ -1.78
CDC40P40968 MSN4YKL062W 1893 nt3.93□□□□□ -1.78
CDC40P40968 SPO1YNL012W 1896 nt3.93□□□□□ -1.78
CDC40P40968 PHO92YDR374C 921 nt3.93□□□□□ -1.78
CDC40P40968 YHB1YGR234W 1200 nt3.93□□□□□ -1.78
CDC40P40968 HSX1tR(CCU)J 72 nt3.93□□□□□ -1.78
CDC40P40968 AAD10YJR155W 867 nt3.93□□□□□ -1.78
CDC40P40968 JLP1YLL057C 1239 nt3.93□□□□□ -1.78
CDC40P40968 YML057C-AYML057C-A 390 nt3.93□□□□□ -1.78
CDC40P40968 YMR085WYMR085W 1299 nt3.93□□□□□ -1.78
CDC40P40968 PPA2YMR267W 933 nt3.93□□□□□ -1.78
CDC40P40968 TRS33YOR115C 807 nt3.93□□□□□ -1.78
CDC40P40968 DON1YDR273W 1098 nt3.92□□□□□ -1.78
CDC40P40968 BUR6YER159C 429 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)CtN(GUU)C 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)FtN(GUU)F 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)GtN(GUU)G 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)KtN(GUU)K 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)LtN(GUU)L 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)N1tN(GUU)N1 74 nt3.92□□□□□ -1.78
CDC40P40968 NAG1YGR031C-A 492 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)N2tN(GUU)N2 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)O1tN(GUU)O1 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)O2tN(GUU)O2 74 nt3.92□□□□□ -1.78
CDC40P40968 tN(GUU)PtN(GUU)P 74 nt3.92□□□□□ -1.78
CDC40P40968 YLL059CYLL059C 507 nt3.92□□□□□ -1.78
CDC40P40968 TDA5YLR426W 981 nt3.92□□□□□ -1.78
CDC40P40968 YIM2YMR151W 438 nt3.92□□□□□ -1.78
CDC40P40968 SCW10YMR305C 1170 nt3.92□□□□□ -1.78
CDC40P40968 CUZ1YNL155W 825 nt3.92□□□□□ -1.78
CDC40P40968 ARR3YPR201W 1215 nt3.92□□□□□ -1.78
CDC40P40968 IME4YGL192W 1803 nt3.92□□□□□ -1.78
CDC40P40968 RNY1YPL123C 1305 nt3.92□□□□□ -1.78
CDC40P40968 ALG9YNL219C 1668 nt3.91□□□□□ -1.78
CDC40P40968 RTN1YDR233C 888 nt3.91□□□□□ -1.78
CDC40P40968 EUG1YDR518W 1554 nt3.91□□□□□ -1.78
CDC40P40968 YGR022CYGR022C 330 nt3.91□□□□□ -1.78
CDC40P40968 PAN1YIR006C 4443 nt3.91□□□□□ -1.78
CDC40P40968 TFS1YLR178C 660 nt3.91□□□□□ -1.78
CDC40P40968 MCP2YLR253W 1710 nt3.91□□□□□ -1.78
CDC40P40968 IMD3YLR432W 1572 nt3.91□□□□□ -1.78
CDC40P40968 APJ1YNL077W 1587 nt3.91□□□□□ -1.78
CDC40P40968 DIP2YLR129W 2832 nt3.91□□□□□ -1.78
CDC40P40968 URC2YDR520C 2319 nt3.9□□□□□ -1.78
CDC40P40968 STB3YDR169C 1542 nt3.9□□□□□ -1.78
CDC40P40968 OLE1YGL055W 1533 nt3.9□□□□□ -1.78
CDC40P40968 YLR345WYLR345W 1530 nt3.9□□□□□ -1.78
CDC40P40968 YCR097W-AYCR097W-A 267 nt3.9□□□□□ -1.79
CDC40P40968 YDL034WYDL034W 345 nt3.9□□□□□ -1.79
CDC40P40968 MMS21YEL019C 804 nt3.9□□□□□ -1.79
CDC40P40968 YGL132WYGL132W 336 nt3.9□□□□□ -1.79
CDC40P40968 YHL034W-AYHL034W-A 462 nt3.9□□□□□ -1.79
CDC40P40968 MDM12YOL009C 816 nt3.9□□□□□ -1.79
CDC40P40968 CBP3YPL215W 1008 nt3.9□□□□□ -1.79
CDC40P40968 YAR1YPL239W 603 nt3.9□□□□□ -1.79
CDC40P40968 YBR255C-AYBR255C-A 363 nt3.9□□□□□ -1.79
CDC40P40968 BUD8YLR353W 1812 nt3.9□□□□□ -1.79
CDC40P40968 KIC1YHR102W 3243 nt3.9□□□□□ -1.79
CDC40P40968 RSC30YHR056C 2652 nt3.89□□□□□ -1.79
CDC40P40968 BUD22YMR014W 1560 nt3.89□□□□□ -1.79
CDC40P40968 MET12YPL023C 1974 nt3.89□□□□□ -1.79
CDC40P40968 GMC1YDR506C 1827 nt3.89□□□□□ -1.79
CDC40P40968 BCP1YDR361C 852 nt3.89□□□□□ -1.79
CDC40P40968 SPI1YER150W 447 nt3.89□□□□□ -1.79
CDC40P40968 SCW4YGR279C 1161 nt3.89□□□□□ -1.79
CDC40P40968 GPP1YIL053W 753 nt3.89□□□□□ -1.79
CDC40P40968 PIR3YKL163W 978 nt3.89□□□□□ -1.79
CDC40P40968 SSP120YLR250W 705 nt3.89□□□□□ -1.79
CDC40P40968 IBD2YNL164C 1056 nt3.89□□□□□ -1.79
CDC40P40968 DAL82YNL314W 768 nt3.89□□□□□ -1.79
CDC40P40968 YNR075C-AYNR075C-A 93 nt3.89□□□□□ -1.79
CDC40P40968 ZPS1YOL154W 750 nt3.89□□□□□ -1.79
CDC40P40968 YMR111CYMR111C 1389 nt3.89□□□□□ -1.79
CDC40P40968 THP1YOL072W 1368 nt3.89□□□□□ -1.79
CDC40P40968 GIR2YDR152W 798 nt3.88□□□□□ -1.79
CDC40P40968 SPO73YER046W 432 nt3.88□□□□□ -1.79
CDC40P40968 COS9YKL219W 1224 nt3.88□□□□□ -1.79
CDC40P40968 ARG1YOL058W 1263 nt3.88□□□□□ -1.79
CDC40P40968 YGK3YOL128C 1128 nt3.88□□□□□ -1.79
CDC40P40968 YOR008W-BYOR008W-B 102 nt3.88□□□□□ -1.79
CDC40P40968 YBR230W-AYBR230W-A 201 nt3.88□□□□□ -1.79
CDC40P40968 YAP1YML007W 1953 nt3.88□□□□□ -1.79
CDC40P40968 FBP26YJL155C 1359 nt3.88□□□□□ -1.79
CDC40P40968 SEG1YMR086W 2883 nt3.87□□□□□ -1.79
CDC40P40968 RHB1YCR027C 630 nt3.87□□□□□ -1.79
CDC40P40968 SCM3YDL139C 672 nt3.87□□□□□ -1.79
CDC40P40968 YDR249CYDR249C 1122 nt3.87□□□□□ -1.79
CDC40P40968 SLX8YER116C 825 nt3.87□□□□□ -1.79
CDC40P40968 EFM4YIL064W 774 nt3.87□□□□□ -1.79
CDC40P40968 YLR326WYLR326W 723 nt3.87□□□□□ -1.79
CDC40P40968 YOL097W-AYOL097W-A 186 nt3.87□□□□□ -1.79
CDC40P40968 RER2YBR002C 861 nt3.87□□□□□ -1.79
CDC40P40968 HPR1YDR138W 2259 nt3.87□□□□□ -1.79
CDC40P40968 PUS9YDL036C 1389 nt3.87□□□□□ -1.79
CDC40P40968 MNN4YKL201C 3537 nt3.87□□□□□ -1.79
CDC40P40968 TCO89YPL180W 2400 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms