Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.37■□□□□ 0.69
CD40P25942 RASA4CP-201ENST00000424092 1398 ntBASIC19.37■□□□□ 0.69
CD40P25942 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.37■□□□□ 0.69
CD40P25942 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CD40P25942 ZNRF2P3-201ENST00000424200 374 ntBASIC19.37■□□□□ 0.69
CD40P25942 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CD40P25942 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.37■□□□□ 0.69
CD40P25942 AC008764.7-201ENST00000593779 1081 ntBASIC19.37■□□□□ 0.69
CD40P25942 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.37■□□□□ 0.69
CD40P25942 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CD40P25942 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CD40P25942 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
CD40P25942 AC144652.1-201ENST00000609974 1624 ntBASIC19.36■□□□□ 0.69
CD40P25942 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD40P25942 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD40P25942 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.36■□□□□ 0.69
CD40P25942 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD40P25942 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD40P25942 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CD40P25942 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CD40P25942 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CD40P25942 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.35■□□□□ 0.69
CD40P25942 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 AC105265.2-201ENST00000467189 838 ntBASIC19.35■□□□□ 0.69
CD40P25942 DUX4L4-201ENST00000566884 1269 ntBASIC19.35■□□□□ 0.69
CD40P25942 CA15P2-201ENST00000611168 834 ntBASIC19.35■□□□□ 0.69
CD40P25942 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.35■□□□□ 0.69
CD40P25942 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD40P25942 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.34■□□□□ 0.69
CD40P25942 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.34■□□□□ 0.69
CD40P25942 LINC01529-204ENST00000636474 1715 ntBASIC19.34■□□□□ 0.69
CD40P25942 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.34■□□□□ 0.69
CD40P25942 AC099791.1-201ENST00000416440 715 ntBASIC19.34■□□□□ 0.69
CD40P25942 BX842568.3-201ENST00000418104 571 ntBASIC19.34■□□□□ 0.69
CD40P25942 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 ABCB10P4-201ENST00000566803 2184 ntBASIC19.34■□□□□ 0.69
CD40P25942 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.34■□□□□ 0.69
CD40P25942 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD40P25942 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.34■□□□□ 0.69
CD40P25942 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CD40P25942 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD40P25942 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD40P25942 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD40P25942 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.33■□□□□ 0.68
CD40P25942 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.33■□□□□ 0.68
CD40P25942 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.33■□□□□ 0.68
CD40P25942 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.33■□□□□ 0.68
CD40P25942 AC233992.3-201ENST00000607491 485 ntBASIC19.33■□□□□ 0.68
CD40P25942 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.33■□□□□ 0.68
CD40P25942 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD40P25942 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CD40P25942 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD40P25942 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD40P25942 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.33■□□□□ 0.68
CD40P25942 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD40P25942 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD40P25942 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.32■□□□□ 0.68
CD40P25942 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.32■□□□□ 0.68
CD40P25942 AL499627.2-201ENST00000606283 725 ntBASIC19.32■□□□□ 0.68
CD40P25942 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CD40P25942 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CD40P25942 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.32■□□□□ 0.68
CD40P25942 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.32■□□□□ 0.68
CD40P25942 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 AC133637.1-201ENST00000624115 1537 ntBASIC19.31■□□□□ 0.68
CD40P25942 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.31■□□□□ 0.68
CD40P25942 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.31■□□□□ 0.68
CD40P25942 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.31■□□□□ 0.68
CD40P25942 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.31■□□□□ 0.68
CD40P25942 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CD40P25942 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CD40P25942 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CD40P25942 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.3■□□□□ 0.68
CD40P25942 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.3■□□□□ 0.68
CD40P25942 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms