Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
SOD1P00441 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.21■■□□□ 1.15
SOD1P00441 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.21■■□□□ 1.15
SOD1P00441 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SOD1P00441 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SOD1P00441 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
SOD1P00441 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOD1P00441 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
SOD1P00441 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOD1P00441 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.2■■□□□ 1.14
SOD1P00441 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.2■■□□□ 1.14
SOD1P00441 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SOD1P00441 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.19■■□□□ 1.14
SOD1P00441 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.19■■□□□ 1.14
SOD1P00441 AC005837.3-201ENST00000612163 286 ntBASIC22.19■■□□□ 1.14
SOD1P00441 AC011298.3-201ENST00000615796 283 ntBASIC22.19■■□□□ 1.14
SOD1P00441 FP325331.1-202ENST00000623531 1380 ntBASIC22.19■■□□□ 1.14
SOD1P00441 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.19■■□□□ 1.14
SOD1P00441 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SOD1P00441 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.18■■□□□ 1.14
SOD1P00441 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SOD1P00441 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SOD1P00441 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 DUX4L4-201ENST00000566884 1269 ntBASIC22.18■■□□□ 1.14
SOD1P00441 MIR4767-201ENST00000582827 78 ntBASIC22.18■■□□□ 1.14
SOD1P00441 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SOD1P00441 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 pRNA.6-201ENST00000610482 90 ntBASIC22.17■■□□□ 1.14
SOD1P00441 pRNA.5-201ENST00000612139 90 ntBASIC22.17■■□□□ 1.14
SOD1P00441 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 pRNA.11-201ENST00000618423 90 ntBASIC22.17■■□□□ 1.14
SOD1P00441 pRNA.13-201ENST00000619112 90 ntBASIC22.17■■□□□ 1.14
SOD1P00441 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.17■■□□□ 1.14
SOD1P00441 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SOD1P00441 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SOD1P00441 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SOD1P00441 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SOD1P00441 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SOD1P00441 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SOD1P00441 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.16■■□□□ 1.14
SOD1P00441 AC136469.2-201ENST00000623944 1028 ntBASIC22.16■■□□□ 1.14
SOD1P00441 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SOD1P00441 LINC01529-204ENST00000636474 1715 ntBASIC22.16■■□□□ 1.14
SOD1P00441 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
SOD1P00441 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
SOD1P00441 AC019069.1-201ENST00000610008 1333 ntBASIC22.15■■□□□ 1.14
SOD1P00441 SUDS3P1-201ENST00000505831 966 ntBASIC22.15■■□□□ 1.14
SOD1P00441 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.15■■□□□ 1.14
SOD1P00441 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.15■■□□□ 1.14
SOD1P00441 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.15■■□□□ 1.14
SOD1P00441 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SOD1P00441 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOD1P00441 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOD1P00441 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.14■■□□□ 1.14
SOD1P00441 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SOD1P00441 EDA-201ENST00000338901 1233 ntBASIC22.14■■□□□ 1.13
SOD1P00441 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.14■■□□□ 1.13
SOD1P00441 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.13
SOD1P00441 AL499627.2-201ENST00000606283 725 ntBASIC22.14■■□□□ 1.13
SOD1P00441 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.14■■□□□ 1.13
SOD1P00441 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOD1P00441 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOD1P00441 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.14■■□□□ 1.13
SOD1P00441 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOD1P00441 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
SOD1P00441 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOD1P00441 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SOD1P00441 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOD1P00441 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOD1P00441 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.13■■□□□ 1.13
SOD1P00441 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOD1P00441 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.13■■□□□ 1.13
SOD1P00441 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.13■■□□□ 1.13
SOD1P00441 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
SOD1P00441 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
SOD1P00441 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.13■■□□□ 1.13
SOD1P00441 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.13■■□□□ 1.13
SOD1P00441 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.13■■□□□ 1.13
SOD1P00441 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOD1P00441 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SOD1P00441 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms