Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CSPG5O95196 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSPG5O95196 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSPG5O95196 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
CSPG5O95196 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSPG5O95196 CCDC92B-201ENST00000575506 885 ntBASIC24.07■■□□□ 1.44
CSPG5O95196 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.07■■□□□ 1.44
CSPG5O95196 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSPG5O95196 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSPG5O95196 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSPG5O95196 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSPG5O95196 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSPG5O95196 AC012414.1-201ENST00000556676 535 ntBASIC24.06■■□□□ 1.44
CSPG5O95196 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CSPG5O95196 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.06■■□□□ 1.44
CSPG5O95196 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.06■■□□□ 1.44
CSPG5O95196 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSPG5O95196 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
CSPG5O95196 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSPG5O95196 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.06■■□□□ 1.44
CSPG5O95196 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSPG5O95196 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.05■■□□□ 1.44
CSPG5O95196 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.05■■□□□ 1.44
CSPG5O95196 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.05■■□□□ 1.44
CSPG5O95196 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSPG5O95196 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSPG5O95196 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSPG5O95196 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSPG5O95196 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
CSPG5O95196 ID1-201ENST00000376105 1233 ntBASIC24.04■■□□□ 1.44
CSPG5O95196 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 IGHV3-19-201ENST00000521488 291 ntBASIC24.04■■□□□ 1.44
CSPG5O95196 AL358852.1-201ENST00000623174 1268 ntBASIC24.04■■□□□ 1.44
CSPG5O95196 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.04■■□□□ 1.44
CSPG5O95196 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSPG5O95196 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.03■■□□□ 1.44
CSPG5O95196 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.03■■□□□ 1.44
CSPG5O95196 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSPG5O95196 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSPG5O95196 AC027612.3-201ENST00000413684 1047 ntBASIC24.03■■□□□ 1.44
CSPG5O95196 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.03■■□□□ 1.44
CSPG5O95196 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.03■■□□□ 1.44
CSPG5O95196 AC010525.1-201ENST00000585559 441 ntBASIC24.03■■□□□ 1.44
CSPG5O95196 NTF6G-201ENST00000591094 616 ntBASIC24.03■■□□□ 1.44
CSPG5O95196 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.02■■□□□ 1.44
CSPG5O95196 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CSPG5O95196 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CSPG5O95196 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.02■■□□□ 1.44
CSPG5O95196 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CSPG5O95196 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.02■■□□□ 1.44
CSPG5O95196 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CSPG5O95196 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.01■■□□□ 1.43
CSPG5O95196 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CSPG5O95196 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CSPG5O95196 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.01■■□□□ 1.43
CSPG5O95196 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CSPG5O95196 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.01■■□□□ 1.43
CSPG5O95196 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.01■■□□□ 1.43
CSPG5O95196 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CSPG5O95196 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CSPG5O95196 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24■■□□□ 1.43
CSPG5O95196 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24■■□□□ 1.43
CSPG5O95196 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CSPG5O95196 KRT18P14-201ENST00000534205 1250 ntBASIC24■■□□□ 1.43
CSPG5O95196 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CSPG5O95196 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CSPG5O95196 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24■■□□□ 1.43
CSPG5O95196 ALDH1A3-203ENST00000557963 1670 ntBASIC23.99■■□□□ 1.43
CSPG5O95196 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.99■■□□□ 1.43
CSPG5O95196 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
CSPG5O95196 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CSPG5O95196 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.99■■□□□ 1.43
CSPG5O95196 MIR572-201ENST00000384983 95 ntBASIC23.99■■□□□ 1.43
CSPG5O95196 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.99■■□□□ 1.43
CSPG5O95196 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CSPG5O95196 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CSPG5O95196 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms