Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC021242.3-201ENST00000607598 1377 ntBASIC16.08■□□□□ 0.16
TRAV4A0A0B4J268 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV4A0A0B4J268 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV4A0A0B4J268 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV4A0A0B4J268 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV4A0A0B4J268 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 KRT125P-201ENST00000546827 989 ntBASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV4A0A0B4J268 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 Z92544.1-202ENST00000571933 1220 ntBASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 MIR6722-201ENST00000617286 78 ntBASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV4A0A0B4J268 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV4A0A0B4J268 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 AC005703.6-201ENST00000623265 1329 ntBASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 AC079630.1-202ENST00000618127 1840 ntBASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV4A0A0B4J268 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV4A0A0B4J268 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms