Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RpgrQ9R0X5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RpgrQ9R0X5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
RpgrQ9R0X5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.96■■□□□ 1.75
RpgrQ9R0X5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RpgrQ9R0X5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RpgrQ9R0X5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
RpgrQ9R0X5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
RpgrQ9R0X5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RpgrQ9R0X5 Mipep-204ENSMUST00000225043 1548 ntBASIC25.9■■□□□ 1.74
RpgrQ9R0X5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RpgrQ9R0X5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RpgrQ9R0X5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RpgrQ9R0X5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
RpgrQ9R0X5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.86■■□□□ 1.73
RpgrQ9R0X5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
RpgrQ9R0X5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RpgrQ9R0X5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
RpgrQ9R0X5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
RpgrQ9R0X5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RpgrQ9R0X5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RpgrQ9R0X5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RpgrQ9R0X5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RpgrQ9R0X5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RpgrQ9R0X5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RpgrQ9R0X5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RpgrQ9R0X5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RpgrQ9R0X5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RpgrQ9R0X5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RpgrQ9R0X5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RpgrQ9R0X5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
RpgrQ9R0X5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RpgrQ9R0X5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.66■■□□□ 1.7
RpgrQ9R0X5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RpgrQ9R0X5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
RpgrQ9R0X5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RpgrQ9R0X5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RpgrQ9R0X5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RpgrQ9R0X5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RpgrQ9R0X5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.6■■□□□ 1.69
RpgrQ9R0X5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RpgrQ9R0X5 Gm24804-201ENSMUST00000174982 85 ntBASIC25.58■■□□□ 1.69
RpgrQ9R0X5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RpgrQ9R0X5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
RpgrQ9R0X5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RpgrQ9R0X5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RpgrQ9R0X5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RpgrQ9R0X5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RpgrQ9R0X5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RpgrQ9R0X5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.51■■□□□ 1.67
RpgrQ9R0X5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.5■■□□□ 1.67
RpgrQ9R0X5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RpgrQ9R0X5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RpgrQ9R0X5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
RpgrQ9R0X5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RpgrQ9R0X5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RpgrQ9R0X5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RpgrQ9R0X5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RpgrQ9R0X5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RpgrQ9R0X5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RpgrQ9R0X5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RpgrQ9R0X5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RpgrQ9R0X5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RpgrQ9R0X5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RpgrQ9R0X5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RpgrQ9R0X5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RpgrQ9R0X5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RpgrQ9R0X5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
RpgrQ9R0X5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RpgrQ9R0X5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RpgrQ9R0X5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RpgrQ9R0X5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RpgrQ9R0X5 Peli2-204ENSMUST00000226513 1320 ntBASIC25.37■■□□□ 1.65
RpgrQ9R0X5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.36■■□□□ 1.65
RpgrQ9R0X5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RpgrQ9R0X5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
RpgrQ9R0X5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
RpgrQ9R0X5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RpgrQ9R0X5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RpgrQ9R0X5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RpgrQ9R0X5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
RpgrQ9R0X5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.32■■□□□ 1.64
RpgrQ9R0X5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RpgrQ9R0X5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RpgrQ9R0X5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RpgrQ9R0X5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RpgrQ9R0X5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RpgrQ9R0X5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RpgrQ9R0X5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RpgrQ9R0X5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RpgrQ9R0X5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RpgrQ9R0X5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RpgrQ9R0X5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RpgrQ9R0X5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.25■■□□□ 1.63
RpgrQ9R0X5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RpgrQ9R0X5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.22■■□□□ 1.63
RpgrQ9R0X5 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.21■■□□□ 1.63
RpgrQ9R0X5 Gm16148-201ENSMUST00000119653 893 ntBASIC25.2■■□□□ 1.62
RpgrQ9R0X5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
RpgrQ9R0X5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms