Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.48■■□□□ 1.51
Zc3h8Q9JJ48 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zc3h8Q9JJ48 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.46■■□□□ 1.51
Zc3h8Q9JJ48 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zc3h8Q9JJ48 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zc3h8Q9JJ48 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Zc3h8Q9JJ48 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h8Q9JJ48 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h8Q9JJ48 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zc3h8Q9JJ48 Peli2-204ENSMUST00000226513 1320 ntBASIC24.42■■□□□ 1.5
Zc3h8Q9JJ48 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3h8Q9JJ48 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Zc3h8Q9JJ48 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3h8Q9JJ48 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zc3h8Q9JJ48 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Zc3h8Q9JJ48 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Zc3h8Q9JJ48 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Zc3h8Q9JJ48 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Zc3h8Q9JJ48 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h8Q9JJ48 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h8Q9JJ48 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zc3h8Q9JJ48 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Zc3h8Q9JJ48 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.32■■□□□ 1.48
Zc3h8Q9JJ48 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3h8Q9JJ48 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Zc3h8Q9JJ48 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.27■■□□□ 1.48
Zc3h8Q9JJ48 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zc3h8Q9JJ48 Gm16148-201ENSMUST00000119653 893 ntBASIC24.25■■□□□ 1.47
Zc3h8Q9JJ48 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Zc3h8Q9JJ48 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h8Q9JJ48 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3h8Q9JJ48 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3h8Q9JJ48 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Zc3h8Q9JJ48 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
Zc3h8Q9JJ48 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h8Q9JJ48 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Zc3h8Q9JJ48 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h8Q9JJ48 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3h8Q9JJ48 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Zc3h8Q9JJ48 Zfp131-205ENSMUST00000223812 663 ntBASIC24.13■■□□□ 1.45
Zc3h8Q9JJ48 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Zc3h8Q9JJ48 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Zc3h8Q9JJ48 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Zc3h8Q9JJ48 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Zc3h8Q9JJ48 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Zc3h8Q9JJ48 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Zc3h8Q9JJ48 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.08■■□□□ 1.45
Zc3h8Q9JJ48 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Zc3h8Q9JJ48 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Zc3h8Q9JJ48 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Zc3h8Q9JJ48 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.07■■□□□ 1.44
Zc3h8Q9JJ48 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Zc3h8Q9JJ48 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zc3h8Q9JJ48 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zc3h8Q9JJ48 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Zc3h8Q9JJ48 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Zc3h8Q9JJ48 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Zc3h8Q9JJ48 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Zc3h8Q9JJ48 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Zc3h8Q9JJ48 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Zc3h8Q9JJ48 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zc3h8Q9JJ48 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Zc3h8Q9JJ48 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zc3h8Q9JJ48 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Zc3h8Q9JJ48 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.95■■□□□ 1.42
Zc3h8Q9JJ48 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Zc3h8Q9JJ48 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zc3h8Q9JJ48 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zc3h8Q9JJ48 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.94■■□□□ 1.42
Zc3h8Q9JJ48 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zc3h8Q9JJ48 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Zc3h8Q9JJ48 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Zc3h8Q9JJ48 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC23.91■■□□□ 1.42
Zc3h8Q9JJ48 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.91■■□□□ 1.42
Zc3h8Q9JJ48 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.91■■□□□ 1.42
Zc3h8Q9JJ48 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.91■■□□□ 1.42
Zc3h8Q9JJ48 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zc3h8Q9JJ48 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
Zc3h8Q9JJ48 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.89■■□□□ 1.42
Zc3h8Q9JJ48 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Zc3h8Q9JJ48 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.88■■□□□ 1.41
Zc3h8Q9JJ48 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Zc3h8Q9JJ48 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Zc3h8Q9JJ48 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Zc3h8Q9JJ48 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
Zc3h8Q9JJ48 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Zc3h8Q9JJ48 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Zc3h8Q9JJ48 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h8Q9JJ48 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3h8Q9JJ48 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Zc3h8Q9JJ48 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.81■■□□□ 1.4
Zc3h8Q9JJ48 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zc3h8Q9JJ48 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Zc3h8Q9JJ48 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Zc3h8Q9JJ48 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Zc3h8Q9JJ48 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Zc3h8Q9JJ48 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Zc3h8Q9JJ48 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.76■■□□□ 1.39
Zc3h8Q9JJ48 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Zc3h8Q9JJ48 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms