Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.6■□□□□ 0.73
Cml3Q9JIY8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cml3Q9JIY8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cml3Q9JIY8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.59■□□□□ 0.73
Cml3Q9JIY8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cml3Q9JIY8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cml3Q9JIY8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.58■□□□□ 0.72
Cml3Q9JIY8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cml3Q9JIY8 Zxda-201ENSMUST00000117281 2621 ntBASIC19.56■□□□□ 0.72
Cml3Q9JIY8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cml3Q9JIY8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cml3Q9JIY8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cml3Q9JIY8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cml3Q9JIY8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cml3Q9JIY8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cml3Q9JIY8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Cml3Q9JIY8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cml3Q9JIY8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.51■□□□□ 0.71
Cml3Q9JIY8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cml3Q9JIY8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cml3Q9JIY8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cml3Q9JIY8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.49■□□□□ 0.71
Cml3Q9JIY8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cml3Q9JIY8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cml3Q9JIY8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cml3Q9JIY8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cml3Q9JIY8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cml3Q9JIY8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cml3Q9JIY8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cml3Q9JIY8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cml3Q9JIY8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cml3Q9JIY8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cml3Q9JIY8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cml3Q9JIY8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cml3Q9JIY8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cml3Q9JIY8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cml3Q9JIY8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cml3Q9JIY8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.39■□□□□ 0.7
Cml3Q9JIY8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cml3Q9JIY8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cml3Q9JIY8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cml3Q9JIY8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cml3Q9JIY8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cml3Q9JIY8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cml3Q9JIY8 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.38■□□□□ 0.69
Cml3Q9JIY8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cml3Q9JIY8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cml3Q9JIY8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cml3Q9JIY8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cml3Q9JIY8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cml3Q9JIY8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cml3Q9JIY8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cml3Q9JIY8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cml3Q9JIY8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cml3Q9JIY8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Cml3Q9JIY8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cml3Q9JIY8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cml3Q9JIY8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cml3Q9JIY8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cml3Q9JIY8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.29■□□□□ 0.68
Cml3Q9JIY8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cml3Q9JIY8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cml3Q9JIY8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cml3Q9JIY8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cml3Q9JIY8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cml3Q9JIY8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cml3Q9JIY8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cml3Q9JIY8 Mipep-204ENSMUST00000225043 1548 ntBASIC19.25■□□□□ 0.67
Cml3Q9JIY8 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.24■□□□□ 0.67
Cml3Q9JIY8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cml3Q9JIY8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cml3Q9JIY8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cml3Q9JIY8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cml3Q9JIY8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cml3Q9JIY8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cml3Q9JIY8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cml3Q9JIY8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.22■□□□□ 0.67
Cml3Q9JIY8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cml3Q9JIY8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cml3Q9JIY8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cml3Q9JIY8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cml3Q9JIY8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cml3Q9JIY8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cml3Q9JIY8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cml3Q9JIY8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cml3Q9JIY8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cml3Q9JIY8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cml3Q9JIY8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.17■□□□□ 0.66
Cml3Q9JIY8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cml3Q9JIY8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cml3Q9JIY8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Cml3Q9JIY8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cml3Q9JIY8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cml3Q9JIY8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cml3Q9JIY8 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.13■□□□□ 0.65
Cml3Q9JIY8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Cml3Q9JIY8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cml3Q9JIY8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cml3Q9JIY8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
Cml3Q9JIY8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms