Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Ppp1r3fQ9JIG4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Ppp1r3fQ9JIG4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Ppp1r3fQ9JIG4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Ppp1r3fQ9JIG4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC33.7■■■□□ 2.98
Ppp1r3fQ9JIG4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33.68■■■□□ 2.98
Ppp1r3fQ9JIG4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Ppp1r3fQ9JIG4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
Ppp1r3fQ9JIG4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33.6■■■□□ 2.97
Ppp1r3fQ9JIG4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC33.6■■■□□ 2.97
Ppp1r3fQ9JIG4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Ppp1r3fQ9JIG4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.59■■■□□ 2.97
Ppp1r3fQ9JIG4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Ppp1r3fQ9JIG4 Mipep-204ENSMUST00000225043 1548 ntBASIC33.57■■■□□ 2.96
Ppp1r3fQ9JIG4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
Ppp1r3fQ9JIG4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC33.53■■■□□ 2.96
Ppp1r3fQ9JIG4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Ppp1r3fQ9JIG4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Ppp1r3fQ9JIG4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
Ppp1r3fQ9JIG4 Gm2415-204ENSMUST00000190235 2004 ntBASIC33.48■■■□□ 2.95
Ppp1r3fQ9JIG4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC33.47■■■□□ 2.95
Ppp1r3fQ9JIG4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
Ppp1r3fQ9JIG4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
Ppp1r3fQ9JIG4 AC166822.3-201ENSMUST00000227394 661 ntBASIC33.41■■■□□ 2.94
Ppp1r3fQ9JIG4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
Ppp1r3fQ9JIG4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93
Ppp1r3fQ9JIG4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
Ppp1r3fQ9JIG4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC33.35■■■□□ 2.93
Ppp1r3fQ9JIG4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ppp1r3fQ9JIG4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Ppp1r3fQ9JIG4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC33.33■■■□□ 2.93
Ppp1r3fQ9JIG4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC33.33■■■□□ 2.93
Ppp1r3fQ9JIG4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Ppp1r3fQ9JIG4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC33.27■■■□□ 2.92
Ppp1r3fQ9JIG4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
Ppp1r3fQ9JIG4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Ppp1r3fQ9JIG4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC33.22■■■□□ 2.91
Ppp1r3fQ9JIG4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33.22■■■□□ 2.91
Ppp1r3fQ9JIG4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Ppp1r3fQ9JIG4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Ppp1r3fQ9JIG4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Ppp1r3fQ9JIG4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Ppp1r3fQ9JIG4 Tdp2-203ENSMUST00000223804 1136 ntBASIC33.17■■■□□ 2.9
Ppp1r3fQ9JIG4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Ppp1r3fQ9JIG4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ppp1r3fQ9JIG4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
Ppp1r3fQ9JIG4 Gm6658-202ENSMUST00000209493 1885 ntBASIC33.14■■■□□ 2.9
Ppp1r3fQ9JIG4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Ppp1r3fQ9JIG4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
Ppp1r3fQ9JIG4 Gm16148-201ENSMUST00000119653 893 ntBASIC33.09■■■□□ 2.89
Ppp1r3fQ9JIG4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Ppp1r3fQ9JIG4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ppp1r3fQ9JIG4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ppp1r3fQ9JIG4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Ppp1r3fQ9JIG4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
Ppp1r3fQ9JIG4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Ppp1r3fQ9JIG4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Ppp1r3fQ9JIG4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC33■■■□□ 2.87
Ppp1r3fQ9JIG4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ppp1r3fQ9JIG4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Ppp1r3fQ9JIG4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Ppp1r3fQ9JIG4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Ppp1r3fQ9JIG4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ppp1r3fQ9JIG4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
Ppp1r3fQ9JIG4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.95■■■□□ 2.87
Ppp1r3fQ9JIG4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
Ppp1r3fQ9JIG4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
Ppp1r3fQ9JIG4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ppp1r3fQ9JIG4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.91■■■□□ 2.86
Ppp1r3fQ9JIG4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Ppp1r3fQ9JIG4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Ppp1r3fQ9JIG4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Ppp1r3fQ9JIG4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Ppp1r3fQ9JIG4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Ppp1r3fQ9JIG4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.86■■■□□ 2.85
Ppp1r3fQ9JIG4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Ppp1r3fQ9JIG4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.85■■■□□ 2.85
Ppp1r3fQ9JIG4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.85■■■□□ 2.85
Ppp1r3fQ9JIG4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.85■■■□□ 2.85
Ppp1r3fQ9JIG4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ppp1r3fQ9JIG4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
Ppp1r3fQ9JIG4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
Ppp1r3fQ9JIG4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Ppp1r3fQ9JIG4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Ppp1r3fQ9JIG4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Ppp1r3fQ9JIG4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Ppp1r3fQ9JIG4 Peli2-204ENSMUST00000226513 1320 ntBASIC32.77■■■□□ 2.84
Ppp1r3fQ9JIG4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Ppp1r3fQ9JIG4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.75■■■□□ 2.83
Ppp1r3fQ9JIG4 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.75■■■□□ 2.83
Ppp1r3fQ9JIG4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Ppp1r3fQ9JIG4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.74■■■□□ 2.83
Ppp1r3fQ9JIG4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.73■■■□□ 2.83
Ppp1r3fQ9JIG4 Gm45855-201ENSMUST00000212546 880 ntBASIC32.72■■■□□ 2.83
Ppp1r3fQ9JIG4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
Ppp1r3fQ9JIG4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.71■■■□□ 2.83
Ppp1r3fQ9JIG4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ppp1r3fQ9JIG4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
Ppp1r3fQ9JIG4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Ppp1r3fQ9JIG4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms