Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.59■□□□□ 0.89
Tnfrsf13bQ9ET35 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf13bQ9ET35 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf13bQ9ET35 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf13bQ9ET35 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf13bQ9ET35 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf13bQ9ET35 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tnfrsf13bQ9ET35 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tnfrsf13bQ9ET35 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf13bQ9ET35 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf13bQ9ET35 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf13bQ9ET35 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf13bQ9ET35 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf13bQ9ET35 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf13bQ9ET35 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tnfrsf13bQ9ET35 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Tnfrsf13bQ9ET35 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf13bQ9ET35 Zxda-201ENSMUST00000117281 2621 ntBASIC20.48■□□□□ 0.87
Tnfrsf13bQ9ET35 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf13bQ9ET35 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf13bQ9ET35 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf13bQ9ET35 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf13bQ9ET35 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf13bQ9ET35 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf13bQ9ET35 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf13bQ9ET35 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf13bQ9ET35 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Tnfrsf13bQ9ET35 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf13bQ9ET35 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf13bQ9ET35 Mipep-204ENSMUST00000225043 1548 ntBASIC20.39■□□□□ 0.85
Tnfrsf13bQ9ET35 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf13bQ9ET35 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf13bQ9ET35 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf13bQ9ET35 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf13bQ9ET35 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf13bQ9ET35 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf13bQ9ET35 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnfrsf13bQ9ET35 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf13bQ9ET35 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.37■□□□□ 0.85
Tnfrsf13bQ9ET35 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf13bQ9ET35 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf13bQ9ET35 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf13bQ9ET35 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf13bQ9ET35 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf13bQ9ET35 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf13bQ9ET35 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.33■□□□□ 0.85
Tnfrsf13bQ9ET35 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf13bQ9ET35 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfrsf13bQ9ET35 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf13bQ9ET35 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfrsf13bQ9ET35 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf13bQ9ET35 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfrsf13bQ9ET35 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfrsf13bQ9ET35 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tnfrsf13bQ9ET35 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf13bQ9ET35 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Tnfrsf13bQ9ET35 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tnfrsf13bQ9ET35 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tnfrsf13bQ9ET35 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tnfrsf13bQ9ET35 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf13bQ9ET35 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf13bQ9ET35 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf13bQ9ET35 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf13bQ9ET35 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf13bQ9ET35 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf13bQ9ET35 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf13bQ9ET35 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Tnfrsf13bQ9ET35 Amer2-203ENSMUST00000225247 2662 ntBASIC20.16■□□□□ 0.82
Tnfrsf13bQ9ET35 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf13bQ9ET35 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf13bQ9ET35 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Tnfrsf13bQ9ET35 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf13bQ9ET35 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf13bQ9ET35 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf13bQ9ET35 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf13bQ9ET35 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf13bQ9ET35 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf13bQ9ET35 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf13bQ9ET35 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf13bQ9ET35 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfrsf13bQ9ET35 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf13bQ9ET35 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tnfrsf13bQ9ET35 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfrsf13bQ9ET35 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tnfrsf13bQ9ET35 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tnfrsf13bQ9ET35 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfrsf13bQ9ET35 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tnfrsf13bQ9ET35 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.02■□□□□ 0.8
Tnfrsf13bQ9ET35 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf13bQ9ET35 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf13bQ9ET35 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf13bQ9ET35 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfrsf13bQ9ET35 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tnfrsf13bQ9ET35 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf13bQ9ET35 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms