Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ube3bQ9ES34 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Ube3bQ9ES34 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ube3bQ9ES34 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC31.84■■■□□ 2.69
Ube3bQ9ES34 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ube3bQ9ES34 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ube3bQ9ES34 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ube3bQ9ES34 Peli2-204ENSMUST00000226513 1320 ntBASIC31.8■■■□□ 2.68
Ube3bQ9ES34 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ube3bQ9ES34 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ube3bQ9ES34 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ube3bQ9ES34 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ube3bQ9ES34 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ube3bQ9ES34 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ube3bQ9ES34 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Ube3bQ9ES34 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
Ube3bQ9ES34 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Ube3bQ9ES34 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ube3bQ9ES34 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ube3bQ9ES34 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Ube3bQ9ES34 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ube3bQ9ES34 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
Ube3bQ9ES34 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
Ube3bQ9ES34 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Ube3bQ9ES34 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.62■■■□□ 2.65
Ube3bQ9ES34 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.57■■■□□ 2.64
Ube3bQ9ES34 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ube3bQ9ES34 Gm16148-201ENSMUST00000119653 893 ntBASIC31.54■■■□□ 2.64
Ube3bQ9ES34 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Ube3bQ9ES34 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ube3bQ9ES34 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ube3bQ9ES34 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ube3bQ9ES34 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ube3bQ9ES34 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ube3bQ9ES34 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ube3bQ9ES34 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
Ube3bQ9ES34 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ube3bQ9ES34 Zfp131-205ENSMUST00000223812 663 ntBASIC31.42■■■□□ 2.62
Ube3bQ9ES34 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ube3bQ9ES34 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ube3bQ9ES34 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ube3bQ9ES34 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Ube3bQ9ES34 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ube3bQ9ES34 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ube3bQ9ES34 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ube3bQ9ES34 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.32■■■□□ 2.6
Ube3bQ9ES34 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Ube3bQ9ES34 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Ube3bQ9ES34 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.3■■■□□ 2.6
Ube3bQ9ES34 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Ube3bQ9ES34 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Ube3bQ9ES34 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
Ube3bQ9ES34 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
Ube3bQ9ES34 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ube3bQ9ES34 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ube3bQ9ES34 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ube3bQ9ES34 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ube3bQ9ES34 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ube3bQ9ES34 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Ube3bQ9ES34 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
Ube3bQ9ES34 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ube3bQ9ES34 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Ube3bQ9ES34 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Ube3bQ9ES34 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31.16■■■□□ 2.58
Ube3bQ9ES34 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31.15■■■□□ 2.58
Ube3bQ9ES34 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ube3bQ9ES34 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ube3bQ9ES34 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ube3bQ9ES34 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.13■■■□□ 2.57
Ube3bQ9ES34 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.11■■■□□ 2.57
Ube3bQ9ES34 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.11■■■□□ 2.57
Ube3bQ9ES34 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Ube3bQ9ES34 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Ube3bQ9ES34 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Ube3bQ9ES34 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Ube3bQ9ES34 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.08■■■□□ 2.57
Ube3bQ9ES34 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ube3bQ9ES34 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.06■■■□□ 2.56
Ube3bQ9ES34 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.04■■■□□ 2.56
Ube3bQ9ES34 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Ube3bQ9ES34 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.02■■■□□ 2.56
Ube3bQ9ES34 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Ube3bQ9ES34 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.01■■■□□ 2.55
Ube3bQ9ES34 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.01■■■□□ 2.55
Ube3bQ9ES34 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
Ube3bQ9ES34 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Ube3bQ9ES34 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ube3bQ9ES34 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ube3bQ9ES34 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Ube3bQ9ES34 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC30.96■■■□□ 2.55
Ube3bQ9ES34 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Ube3bQ9ES34 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Ube3bQ9ES34 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.93■■■□□ 2.54
Ube3bQ9ES34 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
Ube3bQ9ES34 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
Ube3bQ9ES34 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ube3bQ9ES34 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ube3bQ9ES34 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Ube3bQ9ES34 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.87■■■□□ 2.53
Ube3bQ9ES34 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms