Protein–RNA interactions for Protein: Q9CY66

Gar1, H/ACA ribonucleoprotein complex subunit 1, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gar1Q9CY66 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gar1Q9CY66 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gar1Q9CY66 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gar1Q9CY66 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gar1Q9CY66 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gar1Q9CY66 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.28■■□□□ 1
Gar1Q9CY66 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.28■■□□□ 1
Gar1Q9CY66 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gar1Q9CY66 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gar1Q9CY66 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gar1Q9CY66 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Gar1Q9CY66 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gar1Q9CY66 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gar1Q9CY66 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gar1Q9CY66 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Gar1Q9CY66 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gar1Q9CY66 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Gar1Q9CY66 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.18■□□□□ 0.98
Gar1Q9CY66 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gar1Q9CY66 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.17■□□□□ 0.98
Gar1Q9CY66 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gar1Q9CY66 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Gar1Q9CY66 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.16■□□□□ 0.98
Gar1Q9CY66 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gar1Q9CY66 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gar1Q9CY66 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gar1Q9CY66 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gar1Q9CY66 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Gar1Q9CY66 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gar1Q9CY66 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gar1Q9CY66 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gar1Q9CY66 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Gar1Q9CY66 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gar1Q9CY66 Zxda-201ENSMUST00000117281 2621 ntBASIC21.06■□□□□ 0.96
Gar1Q9CY66 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gar1Q9CY66 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Gar1Q9CY66 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Gar1Q9CY66 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gar1Q9CY66 Mipep-204ENSMUST00000225043 1548 ntBASIC21.03■□□□□ 0.96
Gar1Q9CY66 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gar1Q9CY66 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gar1Q9CY66 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gar1Q9CY66 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Gar1Q9CY66 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gar1Q9CY66 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gar1Q9CY66 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Gar1Q9CY66 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Gar1Q9CY66 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gar1Q9CY66 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gar1Q9CY66 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gar1Q9CY66 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gar1Q9CY66 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gar1Q9CY66 Gm24804-201ENSMUST00000174982 85 ntBASIC20.99■□□□□ 0.95
Gar1Q9CY66 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gar1Q9CY66 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gar1Q9CY66 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.98■□□□□ 0.95
Gar1Q9CY66 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.97■□□□□ 0.95
Gar1Q9CY66 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gar1Q9CY66 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gar1Q9CY66 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gar1Q9CY66 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.94■□□□□ 0.94
Gar1Q9CY66 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gar1Q9CY66 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.93■□□□□ 0.94
Gar1Q9CY66 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Gar1Q9CY66 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gar1Q9CY66 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gar1Q9CY66 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gar1Q9CY66 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gar1Q9CY66 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gar1Q9CY66 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gar1Q9CY66 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.88■□□□□ 0.93
Gar1Q9CY66 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gar1Q9CY66 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gar1Q9CY66 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gar1Q9CY66 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gar1Q9CY66 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gar1Q9CY66 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.84■□□□□ 0.93
Gar1Q9CY66 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Gar1Q9CY66 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Gar1Q9CY66 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gar1Q9CY66 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gar1Q9CY66 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gar1Q9CY66 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Gar1Q9CY66 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gar1Q9CY66 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.8■□□□□ 0.92
Gar1Q9CY66 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gar1Q9CY66 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gar1Q9CY66 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Gar1Q9CY66 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gar1Q9CY66 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.75■□□□□ 0.91
Gar1Q9CY66 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
Gar1Q9CY66 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gar1Q9CY66 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Gar1Q9CY66 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gar1Q9CY66 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gar1Q9CY66 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gar1Q9CY66 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gar1Q9CY66 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gar1Q9CY66 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Gar1Q9CY66 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms