Protein–RNA interactions for Protein: Q9CR52

4933400A11Rik, RIKEN cDNA 4933400A11 gene, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933400A11RikQ9CR52 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
4933400A11RikQ9CR52 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
4933400A11RikQ9CR52 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
4933400A11RikQ9CR52 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
4933400A11RikQ9CR52 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
4933400A11RikQ9CR52 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
4933400A11RikQ9CR52 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
4933400A11RikQ9CR52 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.34■■□□□ 1.17
4933400A11RikQ9CR52 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
4933400A11RikQ9CR52 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
4933400A11RikQ9CR52 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
4933400A11RikQ9CR52 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.31■■□□□ 1.16
4933400A11RikQ9CR52 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
4933400A11RikQ9CR52 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
4933400A11RikQ9CR52 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
4933400A11RikQ9CR52 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
4933400A11RikQ9CR52 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
4933400A11RikQ9CR52 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
4933400A11RikQ9CR52 Zxda-201ENSMUST00000117281 2621 ntBASIC22.26■■□□□ 1.15
4933400A11RikQ9CR52 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
4933400A11RikQ9CR52 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
4933400A11RikQ9CR52 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
4933400A11RikQ9CR52 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
4933400A11RikQ9CR52 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
4933400A11RikQ9CR52 Gm16148-201ENSMUST00000119653 893 ntBASIC22.22■■□□□ 1.15
4933400A11RikQ9CR52 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
4933400A11RikQ9CR52 Peli2-204ENSMUST00000226513 1320 ntBASIC22.21■■□□□ 1.15
4933400A11RikQ9CR52 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
4933400A11RikQ9CR52 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
4933400A11RikQ9CR52 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
4933400A11RikQ9CR52 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.18■■□□□ 1.14
4933400A11RikQ9CR52 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
4933400A11RikQ9CR52 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
4933400A11RikQ9CR52 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
4933400A11RikQ9CR52 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
4933400A11RikQ9CR52 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
4933400A11RikQ9CR52 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.14■■□□□ 1.13
4933400A11RikQ9CR52 Zfp131-205ENSMUST00000223812 663 ntBASIC22.13■■□□□ 1.13
4933400A11RikQ9CR52 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
4933400A11RikQ9CR52 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
4933400A11RikQ9CR52 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
4933400A11RikQ9CR52 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
4933400A11RikQ9CR52 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
4933400A11RikQ9CR52 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
4933400A11RikQ9CR52 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
4933400A11RikQ9CR52 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
4933400A11RikQ9CR52 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
4933400A11RikQ9CR52 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
4933400A11RikQ9CR52 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.05■■□□□ 1.12
4933400A11RikQ9CR52 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933400A11RikQ9CR52 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933400A11RikQ9CR52 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.01■■□□□ 1.11
4933400A11RikQ9CR52 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
4933400A11RikQ9CR52 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
4933400A11RikQ9CR52 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
4933400A11RikQ9CR52 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.99■■□□□ 1.11
4933400A11RikQ9CR52 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
4933400A11RikQ9CR52 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
4933400A11RikQ9CR52 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
4933400A11RikQ9CR52 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
4933400A11RikQ9CR52 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.93■■□□□ 1.1
4933400A11RikQ9CR52 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
4933400A11RikQ9CR52 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
4933400A11RikQ9CR52 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.92■■□□□ 1.1
4933400A11RikQ9CR52 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
4933400A11RikQ9CR52 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
4933400A11RikQ9CR52 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
4933400A11RikQ9CR52 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
4933400A11RikQ9CR52 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
4933400A11RikQ9CR52 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
4933400A11RikQ9CR52 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
4933400A11RikQ9CR52 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
4933400A11RikQ9CR52 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
4933400A11RikQ9CR52 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
4933400A11RikQ9CR52 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
4933400A11RikQ9CR52 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.87■■□□□ 1.09
4933400A11RikQ9CR52 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
4933400A11RikQ9CR52 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
4933400A11RikQ9CR52 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
4933400A11RikQ9CR52 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
4933400A11RikQ9CR52 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.83■■□□□ 1.09
4933400A11RikQ9CR52 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
4933400A11RikQ9CR52 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
4933400A11RikQ9CR52 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.79■■□□□ 1.08
4933400A11RikQ9CR52 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.79■■□□□ 1.08
4933400A11RikQ9CR52 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
4933400A11RikQ9CR52 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
4933400A11RikQ9CR52 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
4933400A11RikQ9CR52 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
4933400A11RikQ9CR52 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
4933400A11RikQ9CR52 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.75■■□□□ 1.07
4933400A11RikQ9CR52 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
4933400A11RikQ9CR52 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
4933400A11RikQ9CR52 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
4933400A11RikQ9CR52 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
4933400A11RikQ9CR52 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
4933400A11RikQ9CR52 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.73■■□□□ 1.07
4933400A11RikQ9CR52 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
4933400A11RikQ9CR52 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
4933400A11RikQ9CR52 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms