Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb3Q91XZ7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.8■■□□□ 1.72
Pcdhb3Q91XZ7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhb3Q91XZ7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhb3Q91XZ7 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.78■■□□□ 1.72
Pcdhb3Q91XZ7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhb3Q91XZ7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhb3Q91XZ7 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Pcdhb3Q91XZ7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb3Q91XZ7 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb3Q91XZ7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb3Q91XZ7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.7■■□□□ 1.71
Pcdhb3Q91XZ7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb3Q91XZ7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 Gm26115-201ENSMUST00000175605 87 ntBASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb3Q91XZ7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb3Q91XZ7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Pcdhb3Q91XZ7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.66■■□□□ 1.7
Pcdhb3Q91XZ7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb3Q91XZ7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb3Q91XZ7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb3Q91XZ7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb3Q91XZ7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb3Q91XZ7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb3Q91XZ7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb3Q91XZ7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb3Q91XZ7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdhb3Q91XZ7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb3Q91XZ7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdhb3Q91XZ7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb3Q91XZ7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhb3Q91XZ7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb3Q91XZ7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.56■■□□□ 1.68
Pcdhb3Q91XZ7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb3Q91XZ7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Pcdhb3Q91XZ7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.54■■□□□ 1.68
Pcdhb3Q91XZ7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.54■■□□□ 1.68
Pcdhb3Q91XZ7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Pcdhb3Q91XZ7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb3Q91XZ7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Gm8109-201ENSMUST00000194076 746 ntBASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Pcdhb3Q91XZ7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb3Q91XZ7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb3Q91XZ7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.49■■□□□ 1.67
Pcdhb3Q91XZ7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Pcdhb3Q91XZ7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Pcdhb3Q91XZ7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb3Q91XZ7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.46■■□□□ 1.67
Pcdhb3Q91XZ7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Pcdhb3Q91XZ7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
Pcdhb3Q91XZ7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb3Q91XZ7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Pcdhb3Q91XZ7 Amer2-203ENSMUST00000225247 2662 ntBASIC25.4■■□□□ 1.66
Pcdhb3Q91XZ7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Pcdhb3Q91XZ7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb3Q91XZ7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
Pcdhb3Q91XZ7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb3Q91XZ7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Pcdhb3Q91XZ7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Pcdhb3Q91XZ7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Pcdhb3Q91XZ7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb3Q91XZ7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb3Q91XZ7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdhb3Q91XZ7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb3Q91XZ7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhb3Q91XZ7 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb3Q91XZ7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb3Q91XZ7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb3Q91XZ7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.23■■□□□ 1.63
Pcdhb3Q91XZ7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhb3Q91XZ7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb3Q91XZ7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhb3Q91XZ7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhb3Q91XZ7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhb3Q91XZ7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhb3Q91XZ7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhb3Q91XZ7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms