Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Tram1Q91V04 Zxda-201ENSMUST00000117281 2621 ntBASIC22.17■■□□□ 1.14
Tram1Q91V04 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.17■■□□□ 1.14
Tram1Q91V04 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tram1Q91V04 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tram1Q91V04 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.16■■□□□ 1.14
Tram1Q91V04 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tram1Q91V04 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tram1Q91V04 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.14■■□□□ 1.13
Tram1Q91V04 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tram1Q91V04 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tram1Q91V04 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Tram1Q91V04 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tram1Q91V04 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tram1Q91V04 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Tram1Q91V04 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tram1Q91V04 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tram1Q91V04 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Tram1Q91V04 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Tram1Q91V04 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tram1Q91V04 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Tram1Q91V04 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tram1Q91V04 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tram1Q91V04 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tram1Q91V04 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tram1Q91V04 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tram1Q91V04 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.03■■□□□ 1.12
Tram1Q91V04 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tram1Q91V04 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.03■■□□□ 1.12
Tram1Q91V04 Gm25238-201ENSMUST00000174914 89 ntBASIC22.03■■□□□ 1.12
Tram1Q91V04 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tram1Q91V04 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tram1Q91V04 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tram1Q91V04 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tram1Q91V04 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tram1Q91V04 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Tram1Q91V04 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Tram1Q91V04 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tram1Q91V04 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tram1Q91V04 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Tram1Q91V04 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Tram1Q91V04 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tram1Q91V04 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tram1Q91V04 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Tram1Q91V04 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tram1Q91V04 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tram1Q91V04 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tram1Q91V04 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tram1Q91V04 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Tram1Q91V04 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tram1Q91V04 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.93■■□□□ 1.1
Tram1Q91V04 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Tram1Q91V04 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
Tram1Q91V04 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tram1Q91V04 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.92■■□□□ 1.1
Tram1Q91V04 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.92■■□□□ 1.1
Tram1Q91V04 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tram1Q91V04 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.91■■□□□ 1.1
Tram1Q91V04 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Tram1Q91V04 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tram1Q91V04 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Tram1Q91V04 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tram1Q91V04 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tram1Q91V04 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tram1Q91V04 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
Tram1Q91V04 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tram1Q91V04 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tram1Q91V04 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tram1Q91V04 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tram1Q91V04 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tram1Q91V04 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tram1Q91V04 Mipep-204ENSMUST00000225043 1548 ntBASIC21.82■■□□□ 1.08
Tram1Q91V04 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Tram1Q91V04 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Tram1Q91V04 Rab21-202ENSMUST00000218831 843 ntBASIC21.8■■□□□ 1.08
Tram1Q91V04 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tram1Q91V04 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Tram1Q91V04 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tram1Q91V04 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tram1Q91V04 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tram1Q91V04 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tram1Q91V04 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tram1Q91V04 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Tram1Q91V04 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tram1Q91V04 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Tram1Q91V04 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Tram1Q91V04 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.71■■□□□ 1.07
Tram1Q91V04 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.69■■□□□ 1.06
Tram1Q91V04 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tram1Q91V04 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tram1Q91V04 Amer2-203ENSMUST00000225247 2662 ntBASIC21.67■■□□□ 1.06
Tram1Q91V04 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Tram1Q91V04 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tram1Q91V04 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.66■■□□□ 1.06
Tram1Q91V04 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tram1Q91V04 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Tram1Q91V04 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tram1Q91V04 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.62■■□□□ 1.05
Tram1Q91V04 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.61■■□□□ 1.05
Tram1Q91V04 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms