Protein–RNA interactions for Protein: Q8VHF2

Cdhr5, Cadherin-related family member 5, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr5Q8VHF2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Cdhr5Q8VHF2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.26■■□□□ 1.47
Cdhr5Q8VHF2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdhr5Q8VHF2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cdhr5Q8VHF2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Cdhr5Q8VHF2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Cdhr5Q8VHF2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Cdhr5Q8VHF2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Cdhr5Q8VHF2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Cdhr5Q8VHF2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cdhr5Q8VHF2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Cdhr5Q8VHF2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Cdhr5Q8VHF2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.19■■□□□ 1.46
Cdhr5Q8VHF2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Cdhr5Q8VHF2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Cdhr5Q8VHF2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Cdhr5Q8VHF2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Cdhr5Q8VHF2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdhr5Q8VHF2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Cdhr5Q8VHF2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.15■■□□□ 1.46
Cdhr5Q8VHF2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Cdhr5Q8VHF2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.14■■□□□ 1.45
Cdhr5Q8VHF2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdhr5Q8VHF2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Cdhr5Q8VHF2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Cdhr5Q8VHF2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Cdhr5Q8VHF2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cdhr5Q8VHF2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Cdhr5Q8VHF2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
Cdhr5Q8VHF2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cdhr5Q8VHF2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cdhr5Q8VHF2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cdhr5Q8VHF2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cdhr5Q8VHF2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cdhr5Q8VHF2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cdhr5Q8VHF2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cdhr5Q8VHF2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Cdhr5Q8VHF2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdhr5Q8VHF2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cdhr5Q8VHF2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cdhr5Q8VHF2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdhr5Q8VHF2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Cdhr5Q8VHF2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdhr5Q8VHF2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.96■■□□□ 1.43
Cdhr5Q8VHF2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cdhr5Q8VHF2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cdhr5Q8VHF2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.94■■□□□ 1.42
Cdhr5Q8VHF2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cdhr5Q8VHF2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cdhr5Q8VHF2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Cdhr5Q8VHF2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cdhr5Q8VHF2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.9■■□□□ 1.42
Cdhr5Q8VHF2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cdhr5Q8VHF2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cdhr5Q8VHF2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdhr5Q8VHF2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdhr5Q8VHF2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cdhr5Q8VHF2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cdhr5Q8VHF2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cdhr5Q8VHF2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cdhr5Q8VHF2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Cdhr5Q8VHF2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cdhr5Q8VHF2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.84■■□□□ 1.41
Cdhr5Q8VHF2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.83■■□□□ 1.41
Cdhr5Q8VHF2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr5Q8VHF2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr5Q8VHF2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdhr5Q8VHF2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cdhr5Q8VHF2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.8■■□□□ 1.4
Cdhr5Q8VHF2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdhr5Q8VHF2 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.78■■□□□ 1.4
Cdhr5Q8VHF2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cdhr5Q8VHF2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr5Q8VHF2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr5Q8VHF2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cdhr5Q8VHF2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Cdhr5Q8VHF2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdhr5Q8VHF2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.74■■□□□ 1.39
Cdhr5Q8VHF2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdhr5Q8VHF2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Cdhr5Q8VHF2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdhr5Q8VHF2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cdhr5Q8VHF2 Amer2-203ENSMUST00000225247 2662 ntBASIC23.71■■□□□ 1.39
Cdhr5Q8VHF2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cdhr5Q8VHF2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdhr5Q8VHF2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cdhr5Q8VHF2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cdhr5Q8VHF2 Gm26115-201ENSMUST00000175605 87 ntBASIC23.69■■□□□ 1.38
Cdhr5Q8VHF2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cdhr5Q8VHF2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cdhr5Q8VHF2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Cdhr5Q8VHF2 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.64■■□□□ 1.37
Cdhr5Q8VHF2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
Cdhr5Q8VHF2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Cdhr5Q8VHF2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Cdhr5Q8VHF2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cdhr5Q8VHF2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Cdhr5Q8VHF2 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.61■■□□□ 1.37
Cdhr5Q8VHF2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.6■■□□□ 1.37
Cdhr5Q8VHF2 Gm8109-201ENSMUST00000194076 746 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms