Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Sh3kbp1Q8R550 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Sh3kbp1Q8R550 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Sh3kbp1Q8R550 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Sh3kbp1Q8R550 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.9■■□□□ 1.9
Sh3kbp1Q8R550 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sh3kbp1Q8R550 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Sh3kbp1Q8R550 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Sh3kbp1Q8R550 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
Sh3kbp1Q8R550 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sh3kbp1Q8R550 Mipep-204ENSMUST00000225043 1548 ntBASIC26.8■■□□□ 1.88
Sh3kbp1Q8R550 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.79■■□□□ 1.88
Sh3kbp1Q8R550 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Sh3kbp1Q8R550 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sh3kbp1Q8R550 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sh3kbp1Q8R550 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sh3kbp1Q8R550 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sh3kbp1Q8R550 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sh3kbp1Q8R550 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Sh3kbp1Q8R550 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sh3kbp1Q8R550 Gm16148-201ENSMUST00000119653 893 ntBASIC26.73■■□□□ 1.87
Sh3kbp1Q8R550 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sh3kbp1Q8R550 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sh3kbp1Q8R550 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Sh3kbp1Q8R550 Peli2-204ENSMUST00000226513 1320 ntBASIC26.69■■□□□ 1.86
Sh3kbp1Q8R550 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sh3kbp1Q8R550 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Sh3kbp1Q8R550 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sh3kbp1Q8R550 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sh3kbp1Q8R550 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Sh3kbp1Q8R550 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.65■■□□□ 1.86
Sh3kbp1Q8R550 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Sh3kbp1Q8R550 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Sh3kbp1Q8R550 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
Sh3kbp1Q8R550 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Sh3kbp1Q8R550 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sh3kbp1Q8R550 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sh3kbp1Q8R550 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.57■■□□□ 1.84
Sh3kbp1Q8R550 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.56■■□□□ 1.84
Sh3kbp1Q8R550 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.55■■□□□ 1.84
Sh3kbp1Q8R550 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.55■■□□□ 1.84
Sh3kbp1Q8R550 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3kbp1Q8R550 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Sh3kbp1Q8R550 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Sh3kbp1Q8R550 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.54■■□□□ 1.84
Sh3kbp1Q8R550 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
Sh3kbp1Q8R550 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3kbp1Q8R550 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3kbp1Q8R550 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Sh3kbp1Q8R550 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sh3kbp1Q8R550 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Sh3kbp1Q8R550 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Sh3kbp1Q8R550 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.46■■□□□ 1.83
Sh3kbp1Q8R550 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Sh3kbp1Q8R550 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3kbp1Q8R550 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3kbp1Q8R550 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3kbp1Q8R550 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3kbp1Q8R550 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3kbp1Q8R550 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sh3kbp1Q8R550 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3kbp1Q8R550 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.41■■□□□ 1.82
Sh3kbp1Q8R550 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.41■■□□□ 1.82
Sh3kbp1Q8R550 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sh3kbp1Q8R550 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.4■■□□□ 1.82
Sh3kbp1Q8R550 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.39■■□□□ 1.82
Sh3kbp1Q8R550 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3kbp1Q8R550 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3kbp1Q8R550 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.35■■□□□ 1.81
Sh3kbp1Q8R550 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3kbp1Q8R550 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Sh3kbp1Q8R550 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.31■■□□□ 1.8
Sh3kbp1Q8R550 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sh3kbp1Q8R550 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sh3kbp1Q8R550 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3kbp1Q8R550 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sh3kbp1Q8R550 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh3kbp1Q8R550 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.27■■□□□ 1.8
Sh3kbp1Q8R550 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh3kbp1Q8R550 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.27■■□□□ 1.8
Sh3kbp1Q8R550 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3kbp1Q8R550 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sh3kbp1Q8R550 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
Sh3kbp1Q8R550 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.21■■□□□ 1.79
Sh3kbp1Q8R550 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3kbp1Q8R550 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sh3kbp1Q8R550 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
Sh3kbp1Q8R550 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.78
Sh3kbp1Q8R550 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3kbp1Q8R550 Gm45855-201ENSMUST00000212546 880 ntBASIC26.15■■□□□ 1.78
Sh3kbp1Q8R550 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Sh3kbp1Q8R550 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.12■■□□□ 1.77
Sh3kbp1Q8R550 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Sh3kbp1Q8R550 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sh3kbp1Q8R550 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Sh3kbp1Q8R550 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Sh3kbp1Q8R550 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sh3kbp1Q8R550 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC26.06■■□□□ 1.76
Sh3kbp1Q8R550 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sh3kbp1Q8R550 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms