Protein–RNA interactions for Protein: Q8R297

Vmn1r235, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r235Q8R297 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r235Q8R297 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r235Q8R297 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r235Q8R297 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vmn1r235Q8R297 Rab21-202ENSMUST00000218831 843 ntBASIC21.66■■□□□ 1.06
Vmn1r235Q8R297 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r235Q8R297 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r235Q8R297 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vmn1r235Q8R297 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.63■■□□□ 1.05
Vmn1r235Q8R297 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vmn1r235Q8R297 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Vmn1r235Q8R297 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r235Q8R297 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Vmn1r235Q8R297 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.59■■□□□ 1.05
Vmn1r235Q8R297 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Vmn1r235Q8R297 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r235Q8R297 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vmn1r235Q8R297 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vmn1r235Q8R297 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vmn1r235Q8R297 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vmn1r235Q8R297 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r235Q8R297 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.52■■□□□ 1.04
Vmn1r235Q8R297 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r235Q8R297 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vmn1r235Q8R297 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r235Q8R297 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vmn1r235Q8R297 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vmn1r235Q8R297 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.47■■□□□ 1.03
Vmn1r235Q8R297 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r235Q8R297 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r235Q8R297 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r235Q8R297 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.46■■□□□ 1.03
Vmn1r235Q8R297 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r235Q8R297 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Mipep-204ENSMUST00000225043 1548 ntBASIC21.45■■□□□ 1.02
Vmn1r235Q8R297 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r235Q8R297 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r235Q8R297 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r235Q8R297 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r235Q8R297 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r235Q8R297 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
Vmn1r235Q8R297 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r235Q8R297 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Vmn1r235Q8R297 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vmn1r235Q8R297 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r235Q8R297 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r235Q8R297 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.38■■□□□ 1.01
Vmn1r235Q8R297 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r235Q8R297 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r235Q8R297 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r235Q8R297 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r235Q8R297 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r235Q8R297 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r235Q8R297 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.34■■□□□ 1.01
Vmn1r235Q8R297 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r235Q8R297 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Vmn1r235Q8R297 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r235Q8R297 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.32■■□□□ 1
Vmn1r235Q8R297 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vmn1r235Q8R297 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r235Q8R297 Amer2-203ENSMUST00000225247 2662 ntBASIC21.3■■□□□ 1
Vmn1r235Q8R297 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r235Q8R297 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vmn1r235Q8R297 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vmn1r235Q8R297 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Vmn1r235Q8R297 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r235Q8R297 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vmn1r235Q8R297 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Vmn1r235Q8R297 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Vmn1r235Q8R297 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Vmn1r235Q8R297 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r235Q8R297 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r235Q8R297 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r235Q8R297 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r235Q8R297 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vmn1r235Q8R297 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vmn1r235Q8R297 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r235Q8R297 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Vmn1r235Q8R297 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vmn1r235Q8R297 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vmn1r235Q8R297 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Vmn1r235Q8R297 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r235Q8R297 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Vmn1r235Q8R297 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vmn1r235Q8R297 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r235Q8R297 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vmn1r235Q8R297 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vmn1r235Q8R297 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r235Q8R297 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Vmn1r235Q8R297 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vmn1r235Q8R297 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms