Protein–RNA interactions for Protein: Q8R040

Rpp21, Ribonuclease P protein subunit p21, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp21Q8R040 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rpp21Q8R040 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Rpp21Q8R040 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.31■■□□□ 1
Rpp21Q8R040 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.31■■□□□ 1
Rpp21Q8R040 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rpp21Q8R040 Zxda-201ENSMUST00000117281 2621 ntBASIC21.3■■□□□ 1
Rpp21Q8R040 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rpp21Q8R040 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rpp21Q8R040 Mipep-204ENSMUST00000225043 1548 ntBASIC21.29■■□□□ 1
Rpp21Q8R040 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rpp21Q8R040 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rpp21Q8R040 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rpp21Q8R040 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rpp21Q8R040 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rpp21Q8R040 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.21■□□□□ 0.99
Rpp21Q8R040 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rpp21Q8R040 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rpp21Q8R040 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rpp21Q8R040 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp21Q8R040 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpp21Q8R040 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpp21Q8R040 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpp21Q8R040 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpp21Q8R040 Gm25262-201ENSMUST00000174934 133 ntBASIC21.09■□□□□ 0.97
Rpp21Q8R040 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpp21Q8R040 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpp21Q8R040 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpp21Q8R040 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp21Q8R040 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp21Q8R040 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp21Q8R040 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp21Q8R040 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp21Q8R040 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp21Q8R040 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp21Q8R040 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp21Q8R040 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.99■□□□□ 0.95
Rpp21Q8R040 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Rpp21Q8R040 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp21Q8R040 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp21Q8R040 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rpp21Q8R040 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp21Q8R040 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.95■□□□□ 0.94
Rpp21Q8R040 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp21Q8R040 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp21Q8R040 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp21Q8R040 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp21Q8R040 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.9■□□□□ 0.94
Rpp21Q8R040 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.89■□□□□ 0.94
Rpp21Q8R040 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rpp21Q8R040 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rpp21Q8R040 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rpp21Q8R040 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rpp21Q8R040 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.83■□□□□ 0.93
Rpp21Q8R040 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.93
Rpp21Q8R040 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rpp21Q8R040 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rpp21Q8R040 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rpp21Q8R040 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rpp21Q8R040 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rpp21Q8R040 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.79■□□□□ 0.92
Rpp21Q8R040 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rpp21Q8R040 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rpp21Q8R040 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Gm27322-201ENSMUST00000184007 104 ntBASIC20.77■□□□□ 0.92
Rpp21Q8R040 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.76■□□□□ 0.91
Rpp21Q8R040 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Rpp21Q8R040 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms