Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ShfQ8CG80 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
ShfQ8CG80 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
ShfQ8CG80 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ShfQ8CG80 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
ShfQ8CG80 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ShfQ8CG80 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.37■■□□□ 1.33
ShfQ8CG80 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
ShfQ8CG80 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ShfQ8CG80 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
ShfQ8CG80 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
ShfQ8CG80 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ShfQ8CG80 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ShfQ8CG80 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ShfQ8CG80 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShfQ8CG80 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ShfQ8CG80 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ShfQ8CG80 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
ShfQ8CG80 Gm25262-201ENSMUST00000174934 133 ntBASIC23.23■■□□□ 1.31
ShfQ8CG80 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
ShfQ8CG80 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
ShfQ8CG80 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShfQ8CG80 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
ShfQ8CG80 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
ShfQ8CG80 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShfQ8CG80 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
ShfQ8CG80 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShfQ8CG80 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.16■■□□□ 1.3
ShfQ8CG80 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
ShfQ8CG80 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
ShfQ8CG80 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ShfQ8CG80 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
ShfQ8CG80 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ShfQ8CG80 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ShfQ8CG80 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
ShfQ8CG80 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ShfQ8CG80 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ShfQ8CG80 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.09■■□□□ 1.29
ShfQ8CG80 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ShfQ8CG80 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ShfQ8CG80 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
ShfQ8CG80 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ShfQ8CG80 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.07■■□□□ 1.28
ShfQ8CG80 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ShfQ8CG80 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ShfQ8CG80 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ShfQ8CG80 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.04■■□□□ 1.28
ShfQ8CG80 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ShfQ8CG80 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.03■■□□□ 1.28
ShfQ8CG80 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
ShfQ8CG80 Zxda-201ENSMUST00000117281 2621 ntBASIC23.01■■□□□ 1.27
ShfQ8CG80 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ShfQ8CG80 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ShfQ8CG80 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ShfQ8CG80 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.99■■□□□ 1.27
ShfQ8CG80 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ShfQ8CG80 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.96■■□□□ 1.27
ShfQ8CG80 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ShfQ8CG80 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
ShfQ8CG80 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ShfQ8CG80 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.92■■□□□ 1.26
ShfQ8CG80 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ShfQ8CG80 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
ShfQ8CG80 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
ShfQ8CG80 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.91■■□□□ 1.26
ShfQ8CG80 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.9■■□□□ 1.26
ShfQ8CG80 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
ShfQ8CG80 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
ShfQ8CG80 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
ShfQ8CG80 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
ShfQ8CG80 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
ShfQ8CG80 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
ShfQ8CG80 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
ShfQ8CG80 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ShfQ8CG80 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.85■■□□□ 1.25
ShfQ8CG80 Gm27322-201ENSMUST00000184007 104 ntBASIC22.85■■□□□ 1.25
ShfQ8CG80 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ShfQ8CG80 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
ShfQ8CG80 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ShfQ8CG80 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ShfQ8CG80 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ShfQ8CG80 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ShfQ8CG80 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ShfQ8CG80 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
ShfQ8CG80 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.79■■□□□ 1.24
ShfQ8CG80 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
ShfQ8CG80 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
ShfQ8CG80 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.75■■□□□ 1.23
ShfQ8CG80 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ShfQ8CG80 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShfQ8CG80 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
ShfQ8CG80 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.72■■□□□ 1.23
ShfQ8CG80 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShfQ8CG80 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShfQ8CG80 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ShfQ8CG80 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
ShfQ8CG80 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ShfQ8CG80 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
ShfQ8CG80 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ShfQ8CG80 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms