Protein–RNA interactions for Protein: Q8C7R2

Gm3411, Predicted gene 3411, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3411Q8C7R2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Gm3411Q8C7R2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Gm3411Q8C7R2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Gm3411Q8C7R2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Gm3411Q8C7R2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.7
Gm3411Q8C7R2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Gm3411Q8C7R2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Gm3411Q8C7R2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Gm3411Q8C7R2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC25.65■■□□□ 1.7
Gm3411Q8C7R2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Gm3411Q8C7R2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Gm3411Q8C7R2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm3411Q8C7R2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Gm3411Q8C7R2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Gm3411Q8C7R2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Gm3411Q8C7R2 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.59■■□□□ 1.69
Gm3411Q8C7R2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Gm3411Q8C7R2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Gm3411Q8C7R2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Gm3411Q8C7R2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Gm3411Q8C7R2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Gm3411Q8C7R2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Gm3411Q8C7R2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC25.51■■□□□ 1.67
Gm3411Q8C7R2 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Gm3411Q8C7R2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Gm3411Q8C7R2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm3411Q8C7R2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Gm3411Q8C7R2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gm3411Q8C7R2 Zxda-201ENSMUST00000117281 2621 ntBASIC25.44■■□□□ 1.66
Gm3411Q8C7R2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Gm3411Q8C7R2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.44■■□□□ 1.66
Gm3411Q8C7R2 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.44■■□□□ 1.66
Gm3411Q8C7R2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Gm3411Q8C7R2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Gm3411Q8C7R2 Gm16148-201ENSMUST00000119653 893 ntBASIC25.38■■□□□ 1.65
Gm3411Q8C7R2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Gm3411Q8C7R2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Gm3411Q8C7R2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Gm3411Q8C7R2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Gm3411Q8C7R2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Gm3411Q8C7R2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.33■■□□□ 1.65
Gm3411Q8C7R2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Gm3411Q8C7R2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Gm3411Q8C7R2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Gm3411Q8C7R2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm3411Q8C7R2 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Gm3411Q8C7R2 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.29■■□□□ 1.64
Gm3411Q8C7R2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.28■■□□□ 1.64
Gm3411Q8C7R2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Gm3411Q8C7R2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Gm3411Q8C7R2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Gm3411Q8C7R2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Gm3411Q8C7R2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Gm3411Q8C7R2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3411Q8C7R2 Peli2-204ENSMUST00000226513 1320 ntBASIC25.24■■□□□ 1.63
Gm3411Q8C7R2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3411Q8C7R2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm3411Q8C7R2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Gm3411Q8C7R2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Gm3411Q8C7R2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Gm3411Q8C7R2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3411Q8C7R2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3411Q8C7R2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3411Q8C7R2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Gm3411Q8C7R2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Gm3411Q8C7R2 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Gm3411Q8C7R2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Gm3411Q8C7R2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
Gm3411Q8C7R2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Gm3411Q8C7R2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Gm3411Q8C7R2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Gm3411Q8C7R2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gm3411Q8C7R2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.15■■□□□ 1.62
Gm3411Q8C7R2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gm3411Q8C7R2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Gm3411Q8C7R2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gm3411Q8C7R2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gm3411Q8C7R2 Mipep-204ENSMUST00000225043 1548 ntBASIC25.11■■□□□ 1.61
Gm3411Q8C7R2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Gm3411Q8C7R2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Gm3411Q8C7R2 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.1■■□□□ 1.61
Gm3411Q8C7R2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Gm3411Q8C7R2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Gm3411Q8C7R2 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.07■■□□□ 1.6
Gm3411Q8C7R2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3411Q8C7R2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3411Q8C7R2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm3411Q8C7R2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.06■■□□□ 1.6
Gm3411Q8C7R2 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.06■■□□□ 1.6
Gm3411Q8C7R2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Gm3411Q8C7R2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Gm3411Q8C7R2 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.03■■□□□ 1.6
Gm3411Q8C7R2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.03■■□□□ 1.6
Gm3411Q8C7R2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Gm3411Q8C7R2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3411Q8C7R2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3411Q8C7R2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3411Q8C7R2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3411Q8C7R2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Gm3411Q8C7R2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.99■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms