Protein–RNA interactions for Protein: Q8C4D8

Gm11541, Predicted gene 11541, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11541Q8C4D8 Zxda-201ENSMUST00000117281 2621 ntBASIC23.32■■□□□ 1.32
Gm11541Q8C4D8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm11541Q8C4D8 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.31■■□□□ 1.32
Gm11541Q8C4D8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm11541Q8C4D8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm11541Q8C4D8 Mipep-204ENSMUST00000225043 1548 ntBASIC23.28■■□□□ 1.32
Gm11541Q8C4D8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Gm11541Q8C4D8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Gm11541Q8C4D8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm11541Q8C4D8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm11541Q8C4D8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm11541Q8C4D8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11541Q8C4D8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm11541Q8C4D8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm11541Q8C4D8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Gm11541Q8C4D8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Gm11541Q8C4D8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Gm11541Q8C4D8 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.09■■□□□ 1.29
Gm11541Q8C4D8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm11541Q8C4D8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Gm11541Q8C4D8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Gm11541Q8C4D8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Gm11541Q8C4D8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm11541Q8C4D8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm11541Q8C4D8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Gm11541Q8C4D8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Gm11541Q8C4D8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.06■■□□□ 1.28
Gm11541Q8C4D8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.05■■□□□ 1.28
Gm11541Q8C4D8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Gm11541Q8C4D8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Gm11541Q8C4D8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Gm11541Q8C4D8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.03■■□□□ 1.28
Gm11541Q8C4D8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Gm11541Q8C4D8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Gm11541Q8C4D8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.03■■□□□ 1.28
Gm11541Q8C4D8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Gm11541Q8C4D8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm11541Q8C4D8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23■■□□□ 1.27
Gm11541Q8C4D8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Gm11541Q8C4D8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Gm11541Q8C4D8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Gm11541Q8C4D8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Gm11541Q8C4D8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Gm11541Q8C4D8 Gm24804-201ENSMUST00000174982 85 ntBASIC22.93■■□□□ 1.26
Gm11541Q8C4D8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Gm11541Q8C4D8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm11541Q8C4D8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Gm11541Q8C4D8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Gm11541Q8C4D8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Gm11541Q8C4D8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Gm11541Q8C4D8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm11541Q8C4D8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm11541Q8C4D8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm11541Q8C4D8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Gm11541Q8C4D8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Gm11541Q8C4D8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Gm11541Q8C4D8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm11541Q8C4D8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Gm11541Q8C4D8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm11541Q8C4D8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Gm11541Q8C4D8 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.79■■□□□ 1.24
Gm11541Q8C4D8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm11541Q8C4D8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm11541Q8C4D8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Gm11541Q8C4D8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.79■■□□□ 1.24
Gm11541Q8C4D8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm11541Q8C4D8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.78■■□□□ 1.24
Gm11541Q8C4D8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm11541Q8C4D8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Gm11541Q8C4D8 Peli2-204ENSMUST00000226513 1320 ntBASIC22.78■■□□□ 1.24
Gm11541Q8C4D8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Gm11541Q8C4D8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.76■■□□□ 1.23
Gm11541Q8C4D8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.75■■□□□ 1.23
Gm11541Q8C4D8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm11541Q8C4D8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm11541Q8C4D8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm11541Q8C4D8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Gm11541Q8C4D8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.74■■□□□ 1.23
Gm11541Q8C4D8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Gm11541Q8C4D8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
Gm11541Q8C4D8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm11541Q8C4D8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm11541Q8C4D8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm11541Q8C4D8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm11541Q8C4D8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Gm11541Q8C4D8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.7■■□□□ 1.22
Gm11541Q8C4D8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm11541Q8C4D8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Gm11541Q8C4D8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm11541Q8C4D8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Gm11541Q8C4D8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.67■■□□□ 1.22
Gm11541Q8C4D8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm11541Q8C4D8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm11541Q8C4D8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Gm11541Q8C4D8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm11541Q8C4D8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm11541Q8C4D8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Gm11541Q8C4D8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm11541Q8C4D8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Gm11541Q8C4D8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms