Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.09■□□□□ 0.97
Vma21Q78T54 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Vma21Q78T54 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Vma21Q78T54 Mipep-204ENSMUST00000225043 1548 ntBASIC21.05■□□□□ 0.96
Vma21Q78T54 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Vma21Q78T54 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Vma21Q78T54 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Vma21Q78T54 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.01■□□□□ 0.95
Vma21Q78T54 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vma21Q78T54 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vma21Q78T54 Gm25262-201ENSMUST00000174934 133 ntBASIC21■□□□□ 0.95
Vma21Q78T54 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vma21Q78T54 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vma21Q78T54 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vma21Q78T54 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vma21Q78T54 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.95■□□□□ 0.94
Vma21Q78T54 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.94■□□□□ 0.94
Vma21Q78T54 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vma21Q78T54 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vma21Q78T54 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vma21Q78T54 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Vma21Q78T54 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Vma21Q78T54 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vma21Q78T54 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vma21Q78T54 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Vma21Q78T54 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Vma21Q78T54 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vma21Q78T54 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vma21Q78T54 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vma21Q78T54 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vma21Q78T54 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vma21Q78T54 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vma21Q78T54 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vma21Q78T54 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vma21Q78T54 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.81■□□□□ 0.92
Vma21Q78T54 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vma21Q78T54 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vma21Q78T54 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.78■□□□□ 0.92
Vma21Q78T54 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Vma21Q78T54 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vma21Q78T54 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vma21Q78T54 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vma21Q78T54 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Vma21Q78T54 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vma21Q78T54 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.76■□□□□ 0.91
Vma21Q78T54 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vma21Q78T54 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vma21Q78T54 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vma21Q78T54 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Vma21Q78T54 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vma21Q78T54 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vma21Q78T54 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vma21Q78T54 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vma21Q78T54 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vma21Q78T54 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vma21Q78T54 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vma21Q78T54 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vma21Q78T54 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Vma21Q78T54 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vma21Q78T54 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.66■□□□□ 0.9
Vma21Q78T54 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vma21Q78T54 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vma21Q78T54 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vma21Q78T54 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vma21Q78T54 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.64■□□□□ 0.89
Vma21Q78T54 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vma21Q78T54 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.63■□□□□ 0.89
Vma21Q78T54 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.63■□□□□ 0.89
Vma21Q78T54 Gm27322-201ENSMUST00000184007 104 ntBASIC20.63■□□□□ 0.89
Vma21Q78T54 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Vma21Q78T54 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Vma21Q78T54 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Vma21Q78T54 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vma21Q78T54 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vma21Q78T54 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Vma21Q78T54 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.6■□□□□ 0.89
Vma21Q78T54 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vma21Q78T54 Zxda-201ENSMUST00000117281 2621 ntBASIC20.57■□□□□ 0.88
Vma21Q78T54 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Vma21Q78T54 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21Q78T54 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vma21Q78T54 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vma21Q78T54 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
Vma21Q78T54 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vma21Q78T54 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vma21Q78T54 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vma21Q78T54 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.52■□□□□ 0.88
Vma21Q78T54 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vma21Q78T54 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vma21Q78T54 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vma21Q78T54 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vma21Q78T54 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vma21Q78T54 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vma21Q78T54 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vma21Q78T54 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vma21Q78T54 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vma21Q78T54 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vma21Q78T54 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.47■□□□□ 0.87
Vma21Q78T54 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vma21Q78T54 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms