Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32,29■■■□□ 2,76
Kdm3aQ6PCM1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32,28■■■□□ 2,76
Kdm3aQ6PCM1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC32,27■■■□□ 2,76
Kdm3aQ6PCM1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Kdm3aQ6PCM1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC32,25■■■□□ 2,75
Kdm3aQ6PCM1 Peli2-204ENSMUST00000226513 1320 ntBASIC32,25■■■□□ 2,75
Kdm3aQ6PCM1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32,23■■■□□ 2,75
Kdm3aQ6PCM1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC32,22■■■□□ 2,75
Kdm3aQ6PCM1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC32,2■■■□□ 2,75
Kdm3aQ6PCM1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC32,18■■■□□ 2,74
Kdm3aQ6PCM1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,17■■■□□ 2,74
Kdm3aQ6PCM1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Kdm3aQ6PCM1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Kdm3aQ6PCM1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32,13■■■□□ 2,73
Kdm3aQ6PCM1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,11■■■□□ 2,73
Kdm3aQ6PCM1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32,09■■■□□ 2,73
Kdm3aQ6PCM1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Kdm3aQ6PCM1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC32,08■■■□□ 2,73
Kdm3aQ6PCM1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32,08■■■□□ 2,73
Kdm3aQ6PCM1 Gm16148-201ENSMUST00000119653 893 ntBASIC32,07■■■□□ 2,72
Kdm3aQ6PCM1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC32,01■■■□□ 2,72
Kdm3aQ6PCM1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32,01■■■□□ 2,72
Kdm3aQ6PCM1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32,01■■■□□ 2,72
Kdm3aQ6PCM1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32,01■■■□□ 2,71
Kdm3aQ6PCM1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC32,01■■■□□ 2,71
Kdm3aQ6PCM1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Kdm3aQ6PCM1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Kdm3aQ6PCM1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31,98■■■□□ 2,71
Kdm3aQ6PCM1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31,97■■■□□ 2,71
Kdm3aQ6PCM1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31,97■■■□□ 2,71
Kdm3aQ6PCM1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
Kdm3aQ6PCM1 Zfp131-205ENSMUST00000223812 663 ntBASIC31,96■■■□□ 2,71
Kdm3aQ6PCM1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31,93■■■□□ 2,7
Kdm3aQ6PCM1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC31,91■■■□□ 2,7
Kdm3aQ6PCM1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31,89■■■□□ 2,7
Kdm3aQ6PCM1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31,87■■■□□ 2,69
Kdm3aQ6PCM1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Kdm3aQ6PCM1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,86■■■□□ 2,69
Kdm3aQ6PCM1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC31,85■■■□□ 2,69
Kdm3aQ6PCM1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31,82■■■□□ 2,68
Kdm3aQ6PCM1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Kdm3aQ6PCM1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31,8■■■□□ 2,68
Kdm3aQ6PCM1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31,8■■■□□ 2,68
Kdm3aQ6PCM1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31,8■■■□□ 2,68
Kdm3aQ6PCM1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Kdm3aQ6PCM1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,78■■■□□ 2,68
Kdm3aQ6PCM1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31,76■■■□□ 2,68
Kdm3aQ6PCM1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31,73■■■□□ 2,67
Kdm3aQ6PCM1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31,71■■■□□ 2,67
Kdm3aQ6PCM1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31,71■■■□□ 2,67
Kdm3aQ6PCM1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31,7■■■□□ 2,66
Kdm3aQ6PCM1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Kdm3aQ6PCM1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31,67■■■□□ 2,66
Kdm3aQ6PCM1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31,66■■■□□ 2,66
Kdm3aQ6PCM1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31,65■■■□□ 2,66
Kdm3aQ6PCM1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31,65■■■□□ 2,66
Kdm3aQ6PCM1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31,64■■■□□ 2,66
Kdm3aQ6PCM1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31,64■■■□□ 2,66
Kdm3aQ6PCM1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC31,62■■■□□ 2,65
Kdm3aQ6PCM1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31,61■■■□□ 2,65
Kdm3aQ6PCM1 Gm2415-204ENSMUST00000190235 2004 ntBASIC31,61■■■□□ 2,65
Kdm3aQ6PCM1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Kdm3aQ6PCM1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31,59■■■□□ 2,65
Kdm3aQ6PCM1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31,57■■■□□ 2,64
Kdm3aQ6PCM1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC31,56■■■□□ 2,64
Kdm3aQ6PCM1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31,56■■■□□ 2,64
Kdm3aQ6PCM1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31,56■■■□□ 2,64
Kdm3aQ6PCM1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31,55■■■□□ 2,64
Kdm3aQ6PCM1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,55■■■□□ 2,64
Kdm3aQ6PCM1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31,55■■■□□ 2,64
Kdm3aQ6PCM1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31,55■■■□□ 2,64
Kdm3aQ6PCM1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Kdm3aQ6PCM1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31,51■■■□□ 2,64
Kdm3aQ6PCM1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31,51■■■□□ 2,63
Kdm3aQ6PCM1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31,5■■■□□ 2,63
Kdm3aQ6PCM1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Kdm3aQ6PCM1 Tdp2-203ENSMUST00000223804 1136 ntBASIC31,47■■■□□ 2,63
Kdm3aQ6PCM1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31,46■■■□□ 2,63
Kdm3aQ6PCM1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31,45■■■□□ 2,62
Kdm3aQ6PCM1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31,45■■■□□ 2,62
Kdm3aQ6PCM1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31,45■■■□□ 2,62
Kdm3aQ6PCM1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31,44■■■□□ 2,62
Kdm3aQ6PCM1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31,44■■■□□ 2,62
Kdm3aQ6PCM1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,41■■■□□ 2,62
Kdm3aQ6PCM1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31,41■■■□□ 2,62
Kdm3aQ6PCM1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31,4■■■□□ 2,62
Kdm3aQ6PCM1 Gm6658-202ENSMUST00000209493 1885 ntBASIC31,4■■■□□ 2,62
Kdm3aQ6PCM1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,38■■■□□ 2,61
Kdm3aQ6PCM1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31,38■■■□□ 2,61
Kdm3aQ6PCM1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,37■■■□□ 2,61
Kdm3aQ6PCM1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Kdm3aQ6PCM1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31,34■■■□□ 2,61
Kdm3aQ6PCM1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31,34■■■□□ 2,61
Kdm3aQ6PCM1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31,33■■■□□ 2,61
Kdm3aQ6PCM1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31,32■■■□□ 2,6
Kdm3aQ6PCM1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Kdm3aQ6PCM1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31,29■■■□□ 2,6
Kdm3aQ6PCM1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31,28■■■□□ 2,6
Kdm3aQ6PCM1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31,28■■■□□ 2,6
Kdm3aQ6PCM1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Retrieved 100 of 76,532 protein–RNA pairs in 35,3 ms