Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smim6Q3U0I6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim6Q3U0I6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smim6Q3U0I6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smim6Q3U0I6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smim6Q3U0I6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smim6Q3U0I6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smim6Q3U0I6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.25■□□□□ 0.83
Smim6Q3U0I6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim6Q3U0I6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim6Q3U0I6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
Smim6Q3U0I6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smim6Q3U0I6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Smim6Q3U0I6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim6Q3U0I6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.18■□□□□ 0.82
Smim6Q3U0I6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Smim6Q3U0I6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim6Q3U0I6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Smim6Q3U0I6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim6Q3U0I6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim6Q3U0I6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Smim6Q3U0I6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smim6Q3U0I6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smim6Q3U0I6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.08■□□□□ 0.8
Smim6Q3U0I6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim6Q3U0I6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim6Q3U0I6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim6Q3U0I6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim6Q3U0I6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smim6Q3U0I6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smim6Q3U0I6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim6Q3U0I6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.98■□□□□ 0.79
Smim6Q3U0I6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim6Q3U0I6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim6Q3U0I6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim6Q3U0I6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smim6Q3U0I6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim6Q3U0I6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smim6Q3U0I6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim6Q3U0I6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim6Q3U0I6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smim6Q3U0I6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.9■□□□□ 0.78
Smim6Q3U0I6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim6Q3U0I6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smim6Q3U0I6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smim6Q3U0I6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.87■□□□□ 0.77
Smim6Q3U0I6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smim6Q3U0I6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smim6Q3U0I6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smim6Q3U0I6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smim6Q3U0I6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smim6Q3U0I6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.8■□□□□ 0.76
Smim6Q3U0I6 Amer2-203ENSMUST00000225247 2662 ntBASIC19.79■□□□□ 0.76
Smim6Q3U0I6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smim6Q3U0I6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Smim6Q3U0I6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smim6Q3U0I6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smim6Q3U0I6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.75■□□□□ 0.75
Smim6Q3U0I6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smim6Q3U0I6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smim6Q3U0I6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smim6Q3U0I6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim6Q3U0I6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smim6Q3U0I6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.68■□□□□ 0.74
Smim6Q3U0I6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Smim6Q3U0I6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smim6Q3U0I6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smim6Q3U0I6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms