Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SgcaP82350 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SgcaP82350 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SgcaP82350 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgcaP82350 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgcaP82350 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SgcaP82350 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SgcaP82350 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SgcaP82350 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.47■■□□□ 1.03
SgcaP82350 Gm25238-201ENSMUST00000174914 89 ntBASIC21.45■■□□□ 1.02
SgcaP82350 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SgcaP82350 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SgcaP82350 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.44■■□□□ 1.02
SgcaP82350 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SgcaP82350 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgcaP82350 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.41■■□□□ 1.02
SgcaP82350 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SgcaP82350 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SgcaP82350 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SgcaP82350 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.38■■□□□ 1.01
SgcaP82350 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SgcaP82350 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SgcaP82350 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SgcaP82350 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgcaP82350 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgcaP82350 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SgcaP82350 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SgcaP82350 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SgcaP82350 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SgcaP82350 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.27■■□□□ 1
SgcaP82350 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgcaP82350 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcaP82350 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcaP82350 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcaP82350 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgcaP82350 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcaP82350 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgcaP82350 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SgcaP82350 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgcaP82350 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcaP82350 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgcaP82350 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.21■□□□□ 0.99
SgcaP82350 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SgcaP82350 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SgcaP82350 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcaP82350 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SgcaP82350 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.17■□□□□ 0.98
SgcaP82350 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SgcaP82350 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SgcaP82350 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SgcaP82350 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcaP82350 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SgcaP82350 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SgcaP82350 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgcaP82350 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SgcaP82350 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.15■□□□□ 0.98
SgcaP82350 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
SgcaP82350 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.14■□□□□ 0.97
SgcaP82350 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SgcaP82350 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SgcaP82350 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SgcaP82350 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgcaP82350 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.11■□□□□ 0.97
SgcaP82350 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgcaP82350 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SgcaP82350 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
SgcaP82350 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SgcaP82350 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SgcaP82350 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SgcaP82350 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcaP82350 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
SgcaP82350 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcaP82350 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SgcaP82350 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SgcaP82350 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SgcaP82350 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgcaP82350 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SgcaP82350 Rab21-202ENSMUST00000218831 843 ntBASIC21.04■□□□□ 0.96
SgcaP82350 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SgcaP82350 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SgcaP82350 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SgcaP82350 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SgcaP82350 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SgcaP82350 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SgcaP82350 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SgcaP82350 Mipep-204ENSMUST00000225043 1548 ntBASIC21■□□□□ 0.95
SgcaP82350 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21■□□□□ 0.95
SgcaP82350 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SgcaP82350 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SgcaP82350 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
SgcaP82350 Amer2-203ENSMUST00000225247 2662 ntBASIC20.98■□□□□ 0.95
SgcaP82350 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcaP82350 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SgcaP82350 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcaP82350 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SgcaP82350 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcaP82350 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SgcaP82350 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.94■□□□□ 0.94
SgcaP82350 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SgcaP82350 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms