Protein–RNA interactions for Protein: P63271

Supt4h1a, Transcription elongation factor SPT4-A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Supt4h1aP63271 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Supt4h1aP63271 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Supt4h1aP63271 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Supt4h1aP63271 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Supt4h1aP63271 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Supt4h1aP63271 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Supt4h1aP63271 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Supt4h1aP63271 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Supt4h1aP63271 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Supt4h1aP63271 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Supt4h1aP63271 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Supt4h1aP63271 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.61■■□□□ 1.05
Supt4h1aP63271 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Supt4h1aP63271 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.6■■□□□ 1.05
Supt4h1aP63271 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Supt4h1aP63271 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.57■■□□□ 1.04
Supt4h1aP63271 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Supt4h1aP63271 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Supt4h1aP63271 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Supt4h1aP63271 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Supt4h1aP63271 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Supt4h1aP63271 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Supt4h1aP63271 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.52■■□□□ 1.04
Supt4h1aP63271 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Supt4h1aP63271 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Supt4h1aP63271 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Supt4h1aP63271 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Supt4h1aP63271 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Supt4h1aP63271 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
Supt4h1aP63271 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Supt4h1aP63271 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.47■■□□□ 1.03
Supt4h1aP63271 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Supt4h1aP63271 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Supt4h1aP63271 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Supt4h1aP63271 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Supt4h1aP63271 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Supt4h1aP63271 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Supt4h1aP63271 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Supt4h1aP63271 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Supt4h1aP63271 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Supt4h1aP63271 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Supt4h1aP63271 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Supt4h1aP63271 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Supt4h1aP63271 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Supt4h1aP63271 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Supt4h1aP63271 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Supt4h1aP63271 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Supt4h1aP63271 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.39■■□□□ 1.01
Supt4h1aP63271 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Supt4h1aP63271 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Supt4h1aP63271 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Supt4h1aP63271 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Supt4h1aP63271 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Supt4h1aP63271 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Supt4h1aP63271 Amer2-203ENSMUST00000225247 2662 ntBASIC21.36■■□□□ 1.01
Supt4h1aP63271 Rab21-202ENSMUST00000218831 843 ntBASIC21.35■■□□□ 1.01
Supt4h1aP63271 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Supt4h1aP63271 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Supt4h1aP63271 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Supt4h1aP63271 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.32■■□□□ 1
Supt4h1aP63271 Mipep-204ENSMUST00000225043 1548 ntBASIC21.32■■□□□ 1
Supt4h1aP63271 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Supt4h1aP63271 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.3■■□□□ 1
Supt4h1aP63271 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Supt4h1aP63271 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Supt4h1aP63271 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Supt4h1aP63271 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.27■■□□□ 1
Supt4h1aP63271 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Supt4h1aP63271 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Supt4h1aP63271 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Supt4h1aP63271 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Supt4h1aP63271 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Supt4h1aP63271 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Supt4h1aP63271 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Supt4h1aP63271 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Supt4h1aP63271 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Supt4h1aP63271 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Supt4h1aP63271 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Supt4h1aP63271 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Supt4h1aP63271 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Supt4h1aP63271 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.18■□□□□ 0.98
Supt4h1aP63271 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Supt4h1aP63271 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Supt4h1aP63271 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.14■□□□□ 0.98
Supt4h1aP63271 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.14■□□□□ 0.97
Supt4h1aP63271 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Supt4h1aP63271 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Supt4h1aP63271 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Supt4h1aP63271 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Supt4h1aP63271 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Supt4h1aP63271 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.11■□□□□ 0.97
Supt4h1aP63271 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.09■□□□□ 0.97
Supt4h1aP63271 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Supt4h1aP63271 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.09■□□□□ 0.97
Supt4h1aP63271 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Supt4h1aP63271 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.08■□□□□ 0.97
Supt4h1aP63271 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Supt4h1aP63271 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Supt4h1aP63271 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Supt4h1aP63271 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms