Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sec61a1P61620 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sec61a1P61620 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.5■■□□□ 1.19
Sec61a1P61620 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sec61a1P61620 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Sec61a1P61620 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sec61a1P61620 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sec61a1P61620 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sec61a1P61620 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.45■■□□□ 1.18
Sec61a1P61620 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sec61a1P61620 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sec61a1P61620 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Sec61a1P61620 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.43■■□□□ 1.18
Sec61a1P61620 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sec61a1P61620 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sec61a1P61620 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.41■■□□□ 1.18
Sec61a1P61620 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a1P61620 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sec61a1P61620 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sec61a1P61620 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.38■■□□□ 1.17
Sec61a1P61620 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sec61a1P61620 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sec61a1P61620 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sec61a1P61620 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sec61a1P61620 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sec61a1P61620 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.3■■□□□ 1.16
Sec61a1P61620 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.3■■□□□ 1.16
Sec61a1P61620 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a1P61620 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sec61a1P61620 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.28■■□□□ 1.16
Sec61a1P61620 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.28■■□□□ 1.16
Sec61a1P61620 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sec61a1P61620 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.27■■□□□ 1.16
Sec61a1P61620 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Sec61a1P61620 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Sec61a1P61620 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sec61a1P61620 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sec61a1P61620 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Sec61a1P61620 Gm24804-201ENSMUST00000174982 85 ntBASIC22.25■■□□□ 1.15
Sec61a1P61620 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.25■■□□□ 1.15
Sec61a1P61620 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sec61a1P61620 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sec61a1P61620 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sec61a1P61620 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Sec61a1P61620 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.21■■□□□ 1.15
Sec61a1P61620 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sec61a1P61620 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sec61a1P61620 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sec61a1P61620 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sec61a1P61620 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sec61a1P61620 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sec61a1P61620 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a1P61620 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sec61a1P61620 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Sec61a1P61620 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a1P61620 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sec61a1P61620 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sec61a1P61620 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Sec61a1P61620 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Sec61a1P61620 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
Sec61a1P61620 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a1P61620 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sec61a1P61620 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a1P61620 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sec61a1P61620 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Sec61a1P61620 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a1P61620 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sec61a1P61620 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sec61a1P61620 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
Sec61a1P61620 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Sec61a1P61620 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec61a1P61620 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sec61a1P61620 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.99■■□□□ 1.11
Sec61a1P61620 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Sec61a1P61620 Mipep-204ENSMUST00000225043 1548 ntBASIC21.97■■□□□ 1.11
Sec61a1P61620 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Sec61a1P61620 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sec61a1P61620 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.94■■□□□ 1.1
Sec61a1P61620 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sec61a1P61620 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Sec61a1P61620 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Sec61a1P61620 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sec61a1P61620 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sec61a1P61620 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a1P61620 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sec61a1P61620 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
Sec61a1P61620 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Sec61a1P61620 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms