Protein–RNA interactions for Protein: P61588

Rnd3, Rho-related GTP-binding protein RhoE, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnd3P61588 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnd3P61588 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rnd3P61588 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rnd3P61588 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.51■■□□□ 1.03
Rnd3P61588 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.5■■□□□ 1.03
Rnd3P61588 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Rnd3P61588 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rnd3P61588 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnd3P61588 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnd3P61588 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.48■■□□□ 1.03
Rnd3P61588 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rnd3P61588 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rnd3P61588 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rnd3P61588 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rnd3P61588 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Rnd3P61588 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rnd3P61588 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rnd3P61588 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rnd3P61588 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnd3P61588 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnd3P61588 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnd3P61588 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Rnd3P61588 Mipep-204ENSMUST00000225043 1548 ntBASIC21.39■■□□□ 1.02
Rnd3P61588 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rnd3P61588 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnd3P61588 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnd3P61588 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rnd3P61588 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.38■■□□□ 1.01
Rnd3P61588 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnd3P61588 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnd3P61588 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Rnd3P61588 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnd3P61588 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnd3P61588 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnd3P61588 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnd3P61588 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnd3P61588 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.33■■□□□ 1.01
Rnd3P61588 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.33■■□□□ 1.01
Rnd3P61588 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rnd3P61588 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.32■■□□□ 1
Rnd3P61588 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rnd3P61588 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnd3P61588 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.28■■□□□ 1
Rnd3P61588 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rnd3P61588 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnd3P61588 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnd3P61588 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnd3P61588 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnd3P61588 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnd3P61588 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnd3P61588 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnd3P61588 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnd3P61588 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rnd3P61588 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnd3P61588 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnd3P61588 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnd3P61588 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnd3P61588 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnd3P61588 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.21■□□□□ 0.99
Rnd3P61588 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rnd3P61588 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnd3P61588 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Rnd3P61588 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnd3P61588 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnd3P61588 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnd3P61588 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnd3P61588 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rnd3P61588 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnd3P61588 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
Rnd3P61588 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnd3P61588 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnd3P61588 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnd3P61588 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rnd3P61588 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnd3P61588 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnd3P61588 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnd3P61588 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnd3P61588 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Rnd3P61588 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnd3P61588 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rnd3P61588 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnd3P61588 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnd3P61588 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnd3P61588 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.99■□□□□ 0.95
Rnd3P61588 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnd3P61588 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnd3P61588 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rnd3P61588 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnd3P61588 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnd3P61588 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnd3P61588 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnd3P61588 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Rnd3P61588 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnd3P61588 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnd3P61588 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnd3P61588 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnd3P61588 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnd3P61588 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnd3P61588 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rnd3P61588 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms