Protein–RNA interactions for Protein: P56842

Tcl1b3, Protein TCL1B3, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1b3P56842 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.05■□□□□ 0.32
Tcl1b3P56842 Zxda-201ENSMUST00000117281 2621 ntBASIC17.04■□□□□ 0.32
Tcl1b3P56842 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcl1b3P56842 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.03■□□□□ 0.32
Tcl1b3P56842 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tcl1b3P56842 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcl1b3P56842 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcl1b3P56842 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcl1b3P56842 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcl1b3P56842 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tcl1b3P56842 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tcl1b3P56842 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Tcl1b3P56842 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tcl1b3P56842 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Tcl1b3P56842 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Tcl1b3P56842 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Tcl1b3P56842 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tcl1b3P56842 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Tcl1b3P56842 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tcl1b3P56842 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Tcl1b3P56842 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Tcl1b3P56842 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Tcl1b3P56842 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tcl1b3P56842 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tcl1b3P56842 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tcl1b3P56842 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Tcl1b3P56842 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tcl1b3P56842 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tcl1b3P56842 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tcl1b3P56842 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tcl1b3P56842 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.92■□□□□ 0.3
Tcl1b3P56842 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcl1b3P56842 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcl1b3P56842 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tcl1b3P56842 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tcl1b3P56842 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcl1b3P56842 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcl1b3P56842 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tcl1b3P56842 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tcl1b3P56842 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcl1b3P56842 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tcl1b3P56842 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcl1b3P56842 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcl1b3P56842 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tcl1b3P56842 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Tcl1b3P56842 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Tcl1b3P56842 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.85■□□□□ 0.29
Tcl1b3P56842 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Tcl1b3P56842 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tcl1b3P56842 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcl1b3P56842 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.84■□□□□ 0.29
Tcl1b3P56842 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcl1b3P56842 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tcl1b3P56842 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tcl1b3P56842 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcl1b3P56842 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tcl1b3P56842 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Tcl1b3P56842 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.8■□□□□ 0.28
Tcl1b3P56842 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.8■□□□□ 0.28
Tcl1b3P56842 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tcl1b3P56842 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tcl1b3P56842 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Tcl1b3P56842 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.79■□□□□ 0.28
Tcl1b3P56842 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tcl1b3P56842 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcl1b3P56842 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcl1b3P56842 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcl1b3P56842 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tcl1b3P56842 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Tcl1b3P56842 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Tcl1b3P56842 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC16.76■□□□□ 0.27
Tcl1b3P56842 Gm25238-201ENSMUST00000174914 89 ntBASIC16.76■□□□□ 0.27
Tcl1b3P56842 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.76■□□□□ 0.27
Tcl1b3P56842 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Tcl1b3P56842 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Tcl1b3P56842 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcl1b3P56842 Mipep-204ENSMUST00000225043 1548 ntBASIC16.74■□□□□ 0.27
Tcl1b3P56842 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcl1b3P56842 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.73■□□□□ 0.27
Tcl1b3P56842 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcl1b3P56842 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcl1b3P56842 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcl1b3P56842 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcl1b3P56842 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tcl1b3P56842 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcl1b3P56842 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tcl1b3P56842 Gm6345-201ENSMUST00000180378 1691 ntBASIC16.69■□□□□ 0.26
Tcl1b3P56842 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Tcl1b3P56842 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tcl1b3P56842 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tcl1b3P56842 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Tcl1b3P56842 Rab21-202ENSMUST00000218831 843 ntBASIC16.65■□□□□ 0.26
Tcl1b3P56842 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Tcl1b3P56842 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tcl1b3P56842 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Tcl1b3P56842 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcl1b3P56842 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tcl1b3P56842 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.64■□□□□ 0.25
Tcl1b3P56842 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tcl1b3P56842 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms