Protein–RNA interactions for Protein: P52800

Efnb2, Ephrin-B2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb2P52800 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Efnb2P52800 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Efnb2P52800 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Efnb2P52800 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Efnb2P52800 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Efnb2P52800 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Efnb2P52800 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.34■■□□□ 1.01
Efnb2P52800 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Efnb2P52800 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Efnb2P52800 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Efnb2P52800 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.33■■□□□ 1.01
Efnb2P52800 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Efnb2P52800 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Efnb2P52800 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Efnb2P52800 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Efnb2P52800 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.27■■□□□ 1
Efnb2P52800 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Efnb2P52800 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Efnb2P52800 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Efnb2P52800 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Efnb2P52800 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Efnb2P52800 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.26■□□□□ 0.99
Efnb2P52800 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Efnb2P52800 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Efnb2P52800 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Efnb2P52800 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Efnb2P52800 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Efnb2P52800 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Efnb2P52800 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Efnb2P52800 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Efnb2P52800 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Efnb2P52800 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.22■□□□□ 0.99
Efnb2P52800 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.22■□□□□ 0.99
Efnb2P52800 Rab21-202ENSMUST00000218831 843 ntBASIC21.21■□□□□ 0.99
Efnb2P52800 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Efnb2P52800 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Efnb2P52800 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Efnb2P52800 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Efnb2P52800 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Efnb2P52800 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Efnb2P52800 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Efnb2P52800 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Efnb2P52800 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efnb2P52800 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efnb2P52800 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efnb2P52800 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Efnb2P52800 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Efnb2P52800 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Efnb2P52800 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efnb2P52800 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efnb2P52800 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Efnb2P52800 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
Efnb2P52800 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Efnb2P52800 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Efnb2P52800 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Efnb2P52800 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Efnb2P52800 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Efnb2P52800 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Efnb2P52800 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Efnb2P52800 Mipep-204ENSMUST00000225043 1548 ntBASIC21.1■□□□□ 0.97
Efnb2P52800 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.1■□□□□ 0.97
Efnb2P52800 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Efnb2P52800 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Efnb2P52800 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Efnb2P52800 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.06■□□□□ 0.96
Efnb2P52800 Amer2-203ENSMUST00000225247 2662 ntBASIC21.06■□□□□ 0.96
Efnb2P52800 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Efnb2P52800 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Efnb2P52800 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Efnb2P52800 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Efnb2P52800 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Efnb2P52800 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.02■□□□□ 0.96
Efnb2P52800 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Efnb2P52800 AL845457.1-201ENSMUST00000197244 68 ntBASIC21■□□□□ 0.95
Efnb2P52800 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Efnb2P52800 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Efnb2P52800 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Efnb2P52800 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Efnb2P52800 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Efnb2P52800 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Efnb2P52800 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Efnb2P52800 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Efnb2P52800 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.95■□□□□ 0.94
Efnb2P52800 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Efnb2P52800 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Efnb2P52800 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Efnb2P52800 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Efnb2P52800 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Efnb2P52800 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Efnb2P52800 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Efnb2P52800 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Efnb2P52800 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Efnb2P52800 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Efnb2P52800 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Efnb2P52800 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Efnb2P52800 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Efnb2P52800 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Efnb2P52800 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Efnb2P52800 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Efnb2P52800 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms