Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Timp3P39876 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Timp3P39876 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Timp3P39876 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Timp3P39876 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Timp3P39876 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Timp3P39876 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp3P39876 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Timp3P39876 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Timp3P39876 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Timp3P39876 Gm16148-201ENSMUST00000119653 893 ntBASIC21.18■□□□□ 0.98
Timp3P39876 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Timp3P39876 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Timp3P39876 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Timp3P39876 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Timp3P39876 Mipep-204ENSMUST00000225043 1548 ntBASIC21.15■□□□□ 0.98
Timp3P39876 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.15■□□□□ 0.98
Timp3P39876 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Timp3P39876 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Timp3P39876 Peli2-204ENSMUST00000226513 1320 ntBASIC21.12■□□□□ 0.97
Timp3P39876 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Timp3P39876 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Timp3P39876 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Timp3P39876 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Timp3P39876 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Timp3P39876 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.05■□□□□ 0.96
Timp3P39876 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Timp3P39876 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.04■□□□□ 0.96
Timp3P39876 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Timp3P39876 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Timp3P39876 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Timp3P39876 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21■□□□□ 0.95
Timp3P39876 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Timp3P39876 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Timp3P39876 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Timp3P39876 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Timp3P39876 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Timp3P39876 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Timp3P39876 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.92■□□□□ 0.94
Timp3P39876 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.89■□□□□ 0.94
Timp3P39876 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Timp3P39876 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Timp3P39876 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.88■□□□□ 0.93
Timp3P39876 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Timp3P39876 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.87■□□□□ 0.93
Timp3P39876 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timp3P39876 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Timp3P39876 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Timp3P39876 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Timp3P39876 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.84■□□□□ 0.93
Timp3P39876 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Timp3P39876 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.83■□□□□ 0.92
Timp3P39876 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timp3P39876 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Timp3P39876 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.81■□□□□ 0.92
Timp3P39876 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Timp3P39876 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Timp3P39876 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Timp3P39876 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Timp3P39876 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Timp3P39876 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Timp3P39876 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Timp3P39876 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Timp3P39876 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.72■□□□□ 0.91
Timp3P39876 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Timp3P39876 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Timp3P39876 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.67■□□□□ 0.9
Timp3P39876 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Timp3P39876 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Timp3P39876 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Timp3P39876 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Timp3P39876 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Timp3P39876 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Timp3P39876 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Timp3P39876 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.63■□□□□ 0.89
Timp3P39876 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Timp3P39876 Gm45855-201ENSMUST00000212546 880 ntBASIC20.61■□□□□ 0.89
Timp3P39876 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Timp3P39876 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.6■□□□□ 0.89
Timp3P39876 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Timp3P39876 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Timp3P39876 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp3P39876 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.58■□□□□ 0.89
Timp3P39876 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp3P39876 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Timp3P39876 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp3P39876 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp3P39876 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp3P39876 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp3P39876 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp3P39876 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms