Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pax1P09084 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pax1P09084 Rab21-202ENSMUST00000218831 843 ntBASIC21.06■□□□□ 0.96
Pax1P09084 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pax1P09084 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pax1P09084 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pax1P09084 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pax1P09084 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pax1P09084 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pax1P09084 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pax1P09084 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pax1P09084 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pax1P09084 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pax1P09084 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21■□□□□ 0.95
Pax1P09084 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pax1P09084 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pax1P09084 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pax1P09084 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
Pax1P09084 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pax1P09084 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Pax1P09084 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pax1P09084 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pax1P09084 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pax1P09084 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pax1P09084 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pax1P09084 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pax1P09084 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pax1P09084 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pax1P09084 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pax1P09084 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pax1P09084 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pax1P09084 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.93■□□□□ 0.94
Pax1P09084 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pax1P09084 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.92■□□□□ 0.94
Pax1P09084 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Pax1P09084 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pax1P09084 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.88■□□□□ 0.93
Pax1P09084 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pax1P09084 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pax1P09084 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pax1P09084 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pax1P09084 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pax1P09084 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pax1P09084 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pax1P09084 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pax1P09084 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pax1P09084 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pax1P09084 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pax1P09084 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pax1P09084 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pax1P09084 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pax1P09084 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pax1P09084 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pax1P09084 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pax1P09084 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pax1P09084 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.81■□□□□ 0.92
Pax1P09084 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pax1P09084 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pax1P09084 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pax1P09084 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pax1P09084 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Pax1P09084 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pax1P09084 Mipep-204ENSMUST00000225043 1548 ntBASIC20.78■□□□□ 0.92
Pax1P09084 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pax1P09084 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pax1P09084 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pax1P09084 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pax1P09084 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pax1P09084 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pax1P09084 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.74■□□□□ 0.91
Pax1P09084 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pax1P09084 Amer2-203ENSMUST00000225247 2662 ntBASIC20.71■□□□□ 0.91
Pax1P09084 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Pax1P09084 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pax1P09084 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pax1P09084 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pax1P09084 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pax1P09084 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pax1P09084 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pax1P09084 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.66■□□□□ 0.9
Pax1P09084 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Pax1P09084 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pax1P09084 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pax1P09084 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pax1P09084 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pax1P09084 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pax1P09084 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pax1P09084 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pax1P09084 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Pax1P09084 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pax1P09084 Gm25262-201ENSMUST00000174934 133 ntBASIC20.57■□□□□ 0.88
Pax1P09084 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pax1P09084 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Pax1P09084 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pax1P09084 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pax1P09084 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pax1P09084 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pax1P09084 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.51■□□□□ 0.87
Pax1P09084 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pax1P09084 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms