Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cd74P04441 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cd74P04441 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cd74P04441 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cd74P04441 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cd74P04441 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cd74P04441 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cd74P04441 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cd74P04441 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cd74P04441 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cd74P04441 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cd74P04441 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cd74P04441 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cd74P04441 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cd74P04441 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.5■■□□□ 1.03
Cd74P04441 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cd74P04441 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cd74P04441 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cd74P04441 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cd74P04441 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.48■■□□□ 1.03
Cd74P04441 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cd74P04441 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cd74P04441 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cd74P04441 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cd74P04441 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cd74P04441 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cd74P04441 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.38■■□□□ 1.01
Cd74P04441 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cd74P04441 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cd74P04441 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cd74P04441 Zfp131-205ENSMUST00000223812 663 ntBASIC21.33■■□□□ 1.01
Cd74P04441 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.32■■□□□ 1
Cd74P04441 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cd74P04441 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cd74P04441 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cd74P04441 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cd74P04441 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cd74P04441 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd74P04441 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cd74P04441 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cd74P04441 Gm16148-201ENSMUST00000119653 893 ntBASIC21.27■■□□□ 1
Cd74P04441 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cd74P04441 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cd74P04441 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cd74P04441 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cd74P04441 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cd74P04441 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cd74P04441 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cd74P04441 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Cd74P04441 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cd74P04441 Mipep-204ENSMUST00000225043 1548 ntBASIC21.2■□□□□ 0.98
Cd74P04441 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cd74P04441 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cd74P04441 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cd74P04441 Peli2-204ENSMUST00000226513 1320 ntBASIC21.15■□□□□ 0.98
Cd74P04441 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.15■□□□□ 0.98
Cd74P04441 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.14■□□□□ 0.97
Cd74P04441 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.14■□□□□ 0.97
Cd74P04441 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cd74P04441 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd74P04441 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cd74P04441 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd74P04441 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cd74P04441 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cd74P04441 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.08■□□□□ 0.97
Cd74P04441 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cd74P04441 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cd74P04441 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cd74P04441 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd74P04441 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cd74P04441 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cd74P04441 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cd74P04441 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cd74P04441 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cd74P04441 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
Cd74P04441 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cd74P04441 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cd74P04441 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cd74P04441 Tdp2-203ENSMUST00000223804 1136 ntBASIC21■□□□□ 0.95
Cd74P04441 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Cd74P04441 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.97■□□□□ 0.95
Cd74P04441 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cd74P04441 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cd74P04441 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cd74P04441 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cd74P04441 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.94■□□□□ 0.94
Cd74P04441 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd74P04441 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cd74P04441 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cd74P04441 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.92■□□□□ 0.94
Cd74P04441 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cd74P04441 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.91■□□□□ 0.94
Cd74P04441 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd74P04441 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd74P04441 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd74P04441 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cd74P04441 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cd74P04441 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd74P04441 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cd74P04441 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms