Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
P04212 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04212 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04212 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04212 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04212 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P04212 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04212 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.93■□□□□ 0.94
P04212 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
P04212 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.93■□□□□ 0.94
P04212 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
P04212 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.91■□□□□ 0.94
P04212 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
P04212 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P04212 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
P04212 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
P04212 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04212 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
P04212 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
P04212 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
P04212 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.85■□□□□ 0.93
P04212 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.84■□□□□ 0.93
P04212 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
P04212 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04212 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04212 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04212 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
P04212 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
P04212 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.78■□□□□ 0.92
P04212 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
P04212 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
P04212 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P04212 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
P04212 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04212 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.76■□□□□ 0.91
P04212 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.75■□□□□ 0.91
P04212 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
P04212 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04212 Gm27322-201ENSMUST00000184007 104 ntBASIC20.74■□□□□ 0.91
P04212 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04212 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
P04212 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04212 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04212 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
P04212 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.71■□□□□ 0.91
P04212 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.71■□□□□ 0.91
P04212 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
P04212 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04212 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
P04212 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P04212 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04212 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.68■□□□□ 0.9
P04212 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04212 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04212 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
P04212 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04212 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04212 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04212 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04212 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04212 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04212 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04212 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04212 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04212 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
P04212 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04212 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04212 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04212 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04212 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04212 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P04212 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04212 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04212 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04212 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04212 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
P04212 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04212 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P04212 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
P04212 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P04212 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
P04212 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
P04212 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P04212 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
P04212 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
P04212 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
P04212 Gm26115-201ENSMUST00000175605 87 ntBASIC20.46■□□□□ 0.87
P04212 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.45■□□□□ 0.86
P04212 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
P04212 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
P04212 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
P04212 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
P04212 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P04212 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
P04212 Gm8109-201ENSMUST00000194076 746 ntBASIC20.42■□□□□ 0.86
P04212 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P04212 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.41■□□□□ 0.86
P04212 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
P04212 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04212 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms