Protein–RNA interactions for Protein: O88676

Mmp23, Matrix metalloproteinase-23, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp23O88676 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Mmp23O88676 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp23O88676 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Mmp23O88676 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp23O88676 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp23O88676 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp23O88676 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp23O88676 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp23O88676 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp23O88676 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Mmp23O88676 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp23O88676 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp23O88676 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp23O88676 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp23O88676 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp23O88676 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp23O88676 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp23O88676 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mmp23O88676 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.46■□□□□ 0.71
Mmp23O88676 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp23O88676 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mmp23O88676 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp23O88676 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mmp23O88676 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp23O88676 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mmp23O88676 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Mmp23O88676 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp23O88676 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Mmp23O88676 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp23O88676 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp23O88676 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp23O88676 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp23O88676 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.36■□□□□ 0.69
Mmp23O88676 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp23O88676 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp23O88676 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp23O88676 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp23O88676 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Mmp23O88676 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp23O88676 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp23O88676 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp23O88676 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp23O88676 Gm27325-201ENSMUST00000175467 74 ntBASIC19.28■□□□□ 0.68
Mmp23O88676 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp23O88676 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp23O88676 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp23O88676 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp23O88676 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.24■□□□□ 0.67
Mmp23O88676 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp23O88676 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp23O88676 Amer2-203ENSMUST00000225247 2662 ntBASIC19.22■□□□□ 0.67
Mmp23O88676 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp23O88676 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp23O88676 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp23O88676 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp23O88676 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp23O88676 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp23O88676 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp23O88676 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp23O88676 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp23O88676 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp23O88676 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp23O88676 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp23O88676 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.16■□□□□ 0.66
Mmp23O88676 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp23O88676 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Mmp23O88676 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mmp23O88676 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp23O88676 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp23O88676 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp23O88676 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp23O88676 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mmp23O88676 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp23O88676 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp23O88676 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp23O88676 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp23O88676 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp23O88676 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Mmp23O88676 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Mmp23O88676 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mmp23O88676 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp23O88676 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp23O88676 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mmp23O88676 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.08■□□□□ 0.64
Mmp23O88676 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp23O88676 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp23O88676 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp23O88676 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp23O88676 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Mmp23O88676 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mmp23O88676 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.07■□□□□ 0.64
Mmp23O88676 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Mmp23O88676 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp23O88676 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Mmp23O88676 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mmp23O88676 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Mmp23O88676 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp23O88676 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.01■□□□□ 0.63
Mmp23O88676 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mmp23O88676 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms